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  5. Pp1s402_51V6

Pp1s402_51V6


Description : MHF15.9; expressed protein [Arabidopsis thaliana]


Gene families : OG_42_0002109 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002109_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Physcomitrella release: Pp1s402_51V6
Cluster HCCA clusters: Cluster_47

Target Alias Description ECC score Gene Family Method Actions
54466 No alias FASCICLIN-like arabinogalactan protein 17 precursor 0.03 Orthogroups_2024-Update
A4A49_13417 No alias fasciclin-like arabinogalactan protein 17 0.04 Orthogroups_2024-Update
At2g35860 No alias FLA16 [Source:UniProtKB/TrEMBL;Acc:A0A178VR39] 0.03 Orthogroups_2024-Update
Bradi1g06290 No alias FASCICLIN-like arabinogalactan protein 16 precursor 0.02 Orthogroups_2024-Update
Bradi1g57040 No alias FASCICLIN-like arabinogalactan protein 16 precursor 0.02 Orthogroups_2024-Update
Brara.A03392.1 No alias Fasciclin-type arabinogalactan protein 0.03 Orthogroups_2024-Update
Brara.C01799.1 No alias Fasciclin-type arabinogalactan protein 0.04 Orthogroups_2024-Update
Brara.D00595.1 No alias Fasciclin-type arabinogalactan protein 0.02 Orthogroups_2024-Update
Brara.D02172.1 No alias Fasciclin-type arabinogalactan protein 0.02 Orthogroups_2024-Update
Brara.E02909.1 No alias Fasciclin-type arabinogalactan protein 0.04 Orthogroups_2024-Update
Glyma.06G308600 No alias FASCICLIN-like arabinogalactan protein 16 precursor 0.02 Orthogroups_2024-Update
Glyma.13G311000 No alias FASCICLIN-like arabinogalactan protein 17 precursor 0.02 Orthogroups_2024-Update
LOC_Os03g57460 No alias fasciclin domain containing protein, expressed 0.02 Orthogroups_2024-Update
LOC_Os07g06680 No alias fasciclin domain containing protein, expressed 0.02 Orthogroups_2024-Update
MA_28601g0010 No alias (at5g06390 : 87.0) FASCICLIN-like arabinogalactan... 0.02 Orthogroups_2024-Update
MA_28601g0020 No alias (at5g06390 : 377.0) FASCICLIN-like arabinogalactan... 0.03 Orthogroups_2024-Update
MA_43595g0010 No alias (at5g06390 : 424.0) FASCICLIN-like arabinogalactan... 0.02 Orthogroups_2024-Update
PSME_00051048-RA No alias (at5g06390 : 407.0) FASCICLIN-like arabinogalactan... 0.03 Orthogroups_2024-Update
Potri.016G066500 No alias FASCICLIN-like arabinogalactan protein 17 precursor 0.03 Orthogroups_2024-Update
Seita.2G038200.1 No alias Fasciclin-type arabinogalactan protein 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Predicted GO
MF GO:0003700 DNA-binding transcription factor activity IEP Predicted GO
MF GO:0003824 catalytic activity IEP Predicted GO
MF GO:0004175 endopeptidase activity IEP Predicted GO
MF GO:0004252 serine-type endopeptidase activity IEP Predicted GO
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Predicted GO
MF GO:0004568 chitinase activity IEP Predicted GO
MF GO:0005337 nucleoside transmembrane transporter activity IEP Predicted GO
BP GO:0006022 aminoglycan metabolic process IEP Predicted GO
BP GO:0006026 aminoglycan catabolic process IEP Predicted GO
BP GO:0006030 chitin metabolic process IEP Predicted GO
BP GO:0006032 chitin catabolic process IEP Predicted GO
BP GO:0006040 amino sugar metabolic process IEP Predicted GO
BP GO:0006355 regulation of transcription, DNA-templated IEP Predicted GO
MF GO:0008121 ubiquinol-cytochrome-c reductase activity IEP Predicted GO
BP GO:0008150 biological_process IEP Predicted GO
MF GO:0008236 serine-type peptidase activity IEP Predicted GO
MF GO:0009055 electron transfer activity IEP Predicted GO
BP GO:0009889 regulation of biosynthetic process IEP Predicted GO
BP GO:0010468 regulation of gene expression IEP Predicted GO
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Predicted GO
BP GO:0015858 nucleoside transport IEP Predicted GO
BP GO:0015931 nucleobase-containing compound transport IEP Predicted GO
MF GO:0015932 nucleobase-containing compound transmembrane transporter activity IEP Predicted GO
MF GO:0016681 oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor IEP Predicted GO
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Predicted GO
MF GO:0016787 hydrolase activity IEP Predicted GO
MF GO:0016790 thiolester hydrolase activity IEP Predicted GO
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Predicted GO
BP GO:0016998 cell wall macromolecule catabolic process IEP Predicted GO
MF GO:0017171 serine hydrolase activity IEP Predicted GO
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Predicted GO
BP GO:0019222 regulation of metabolic process IEP Predicted GO
CC GO:0030118 clathrin coat IEP Predicted GO
CC GO:0030125 clathrin vesicle coat IEP Predicted GO
CC GO:0030130 clathrin coat of trans-Golgi network vesicle IEP Predicted GO
CC GO:0030132 clathrin coat of coated pit IEP Predicted GO
BP GO:0031323 regulation of cellular metabolic process IEP Predicted GO
BP GO:0031326 regulation of cellular biosynthetic process IEP Predicted GO
BP GO:0042737 drug catabolic process IEP Predicted GO
MF GO:0043565 sequence-specific DNA binding IEP Predicted GO
BP GO:0044036 cell wall macromolecule metabolic process IEP Predicted GO
BP GO:0046348 amino sugar catabolic process IEP Predicted GO
MF GO:0046933 proton-transporting ATP synthase activity, rotational mechanism IEP Predicted GO
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Predicted GO
BP GO:0051252 regulation of RNA metabolic process IEP Predicted GO
MF GO:0051537 2 iron, 2 sulfur cluster binding IEP Predicted GO
BP GO:0060255 regulation of macromolecule metabolic process IEP Predicted GO
BP GO:0080090 regulation of primary metabolic process IEP Predicted GO
MF GO:0140110 transcription regulator activity IEP Predicted GO
BP GO:1901071 glucosamine-containing compound metabolic process IEP Predicted GO
BP GO:1901072 glucosamine-containing compound catabolic process IEP Predicted GO
BP GO:1901264 carbohydrate derivative transport IEP Predicted GO
MF GO:1901505 carbohydrate derivative transmembrane transporter activity IEP Predicted GO
BP GO:1901642 nucleoside transmembrane transport IEP Predicted GO
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Predicted GO
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Predicted GO
BP GO:2001141 regulation of RNA biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR000782 FAS1_domain 326 449
IPR000782 FAS1_domain 77 205
No external refs found!