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  5. Pp1s410_38V6

Pp1s410_38V6


Description : histone h3


Gene families : OG_42_0000090 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000090_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Physcomitrella release: Pp1s410_38V6
Cluster HCCA clusters: Cluster_291

Target Alias Description ECC score Gene Family Method Actions
HORVU1Hr1G020050.3 No alias histone *(H3) 0.03 Orthogroups_2024-Update
HORVU1Hr1G020070.2 No alias histone *(H3) 0.03 Orthogroups_2024-Update
MA_10432805g0020 No alias (at5g65360 : 226.0) Histone superfamily protein;... 0.03 Orthogroups_2024-Update
Mp7g16200.1 No alias histone (H3) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEA InterProScan predictions
MF GO:0003677 DNA binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0005092 GDP-dissociation inhibitor activity IEP Predicted GO
MF GO:0005094 Rho GDP-dissociation inhibitor activity IEP Predicted GO
BP GO:0008380 RNA splicing IEP Predicted GO
MF GO:0030695 GTPase regulator activity IEP Predicted GO
CC GO:0035145 exon-exon junction complex IEP Predicted GO
CC GO:0044428 nuclear part IEP Predicted GO
CC GO:0044451 nucleoplasm part IEP Predicted GO
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP Predicted GO
CC GO:0071821 FANCM-MHF complex IEP Predicted GO
InterPro domains Description Start Stop
IPR007125 Histone_H2A/H2B/H3 1 132
No external refs found!