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  5. Solyc01g099790

Solyc01g099790


Description : RING/U-box superfamily protein (AHRD V3.3 *** AT3G05545.1)


Gene families : OG_42_0001647 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001647_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc01g099790
Cluster HCCA clusters: Cluster_150

Target Alias Description ECC score Gene Family Method Actions
Seita.7G266900.1 No alias E3 ubiquitin ligase *(RFI2) 0.03 Orthogroups_2024-Update
Sopen01g043310 No alias Ring finger domain 0.06 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
MF GO:0008270 zinc ion binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0004133 glycogen debranching enzyme activity IEP Predicted GO
MF GO:0004134 4-alpha-glucanotransferase activity IEP Predicted GO
MF GO:0004332 fructose-bisphosphate aldolase activity IEP Predicted GO
MF GO:0004609 phosphatidylserine decarboxylase activity IEP Predicted GO
MF GO:0004813 alanine-tRNA ligase activity IEP Predicted GO
BP GO:0006419 alanyl-tRNA aminoacylation IEP Predicted GO
BP GO:0006801 superoxide metabolic process IEP Predicted GO
MF GO:0008440 inositol-1,4,5-trisphosphate 3-kinase activity IEP Predicted GO
MF GO:0016830 carbon-carbon lyase activity IEP Predicted GO
MF GO:0016832 aldehyde-lyase activity IEP Predicted GO
BP GO:0017038 protein import IEP Predicted GO
MF GO:0043565 sequence-specific DNA binding IEP Predicted GO
MF GO:0051766 inositol trisphosphate kinase activity IEP Predicted GO
BP GO:0072593 reactive oxygen species metabolic process IEP Predicted GO
MF GO:0098599 palmitoyl hydrolase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR001841 Znf_RING 30 76
No external refs found!