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  5. Pp1s41_154V6

Pp1s41_154V6


Description : coatomer protein gamma-subunit


Gene families : OG_42_0003878 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0003878_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Physcomitrella release: Pp1s41_154V6
Cluster HCCA clusters: Cluster_264

Target Alias Description ECC score Gene Family Method Actions
268757 No alias coatomer gamma-2 subunit, putative / gamma-2 coat... 0.02 Orthogroups_2024-Update
Bradi1g54510 No alias coatomer gamma-2 subunit, putative / gamma-2 coat... 0.04 Orthogroups_2024-Update
Bradi1g69000 No alias coatomer gamma-2 subunit, putative / gamma-2 coat... 0.04 Orthogroups_2024-Update
Cre06.g310750 No alias coatomer gamma-2 subunit, putative / gamma-2 coat... 0.02 Orthogroups_2024-Update
Glyma.04G013200 No alias coatomer gamma-2 subunit, putative / gamma-2 coat... 0.03 Orthogroups_2024-Update
Glyma.11G118600 No alias coatomer gamma-2 subunit, putative / gamma-2 coat... 0.02 Orthogroups_2024-Update
HORVU1Hr1G042050.17 No alias subunit gamma of cargo adaptor F-subcomplex 0.03 Orthogroups_2024-Update
Kfl00637_0070 kfl00637_0070_v1.1 (at4g34450 : 1191.0) coatomer gamma-2 subunit, putative... 0.02 Orthogroups_2024-Update
PSME_00017732-RA No alias (at4g34450 : 1333.0) coatomer gamma-2 subunit, putative... 0.03 Orthogroups_2024-Update
Potri.004G153500 No alias coatomer gamma-2 subunit, putative / gamma-2 coat... 0.04 Orthogroups_2024-Update
Seita.2G076200.1 No alias subunit gamma of cargo adaptor F-subcomplex 0.03 Orthogroups_2024-Update
Seita.9G479500.1 No alias subunit gamma of cargo adaptor F-subcomplex 0.02 Orthogroups_2024-Update
Solyc01g109540 No alias Coatomer subunit gamma (AHRD V3.3 *** K4B3G7_SOLLC) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005198 structural molecule activity IEA InterProScan predictions
BP GO:0006886 intracellular protein transport IEA InterProScan predictions
BP GO:0016192 vesicle-mediated transport IEA InterProScan predictions
CC GO:0030117 membrane coat IEA InterProScan predictions
CC GO:0030126 COPI vesicle coat IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0000062 fatty-acyl-CoA binding IEP Predicted GO
CC GO:0000145 exocyst IEP Predicted GO
BP GO:0001522 pseudouridine synthesis IEP Predicted GO
MF GO:0003779 actin binding IEP Predicted GO
MF GO:0003824 catalytic activity IEP Predicted GO
MF GO:0004180 carboxypeptidase activity IEP Predicted GO
MF GO:0004185 serine-type carboxypeptidase activity IEP Predicted GO
MF GO:0005337 nucleoside transmembrane transporter activity IEP Predicted GO
MF GO:0005515 protein binding IEP Predicted GO
BP GO:0006888 ER to Golgi vesicle-mediated transport IEP Predicted GO
BP GO:0006904 vesicle docking involved in exocytosis IEP Predicted GO
BP GO:0007010 cytoskeleton organization IEP Predicted GO
MF GO:0008092 cytoskeletal protein binding IEP Predicted GO
MF GO:0008168 methyltransferase activity IEP Predicted GO
MF GO:0008483 transaminase activity IEP Predicted GO
MF GO:0008509 anion transmembrane transporter activity IEP Predicted GO
MF GO:0009982 pseudouridine synthase activity IEP Predicted GO
MF GO:0015098 molybdate ion transmembrane transporter activity IEP Predicted GO
MF GO:0015103 inorganic anion transmembrane transporter activity IEP Predicted GO
BP GO:0015689 molybdate ion transport IEP Predicted GO
BP GO:0015858 nucleoside transport IEP Predicted GO
BP GO:0015931 nucleobase-containing compound transport IEP Predicted GO
MF GO:0015932 nucleobase-containing compound transmembrane transporter activity IEP Predicted GO
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Predicted GO
MF GO:0016769 transferase activity, transferring nitrogenous groups IEP Predicted GO
MF GO:0016787 hydrolase activity IEP Predicted GO
MF GO:0016853 isomerase activity IEP Predicted GO
BP GO:0022406 membrane docking IEP Predicted GO
CC GO:0030127 COPII vesicle coat IEP Predicted GO
MF GO:0033218 amide binding IEP Predicted GO
CC GO:0044448 cell cortex part IEP Predicted GO
BP GO:0048278 vesicle docking IEP Predicted GO
BP GO:0051640 organelle localization IEP Predicted GO
BP GO:0140029 exocytic process IEP Predicted GO
BP GO:0140056 organelle localization by membrane tethering IEP Predicted GO
BP GO:1901264 carbohydrate derivative transport IEP Predicted GO
MF GO:1901505 carbohydrate derivative transmembrane transporter activity IEP Predicted GO
MF GO:1901567 fatty acid derivative binding IEP Predicted GO
BP GO:1901642 nucleoside transmembrane transport IEP Predicted GO
MF GO:1901681 sulfur compound binding IEP Predicted GO
InterPro domains Description Start Stop
IPR032154 Coatomer_g_Cpla 774 888
IPR013040 Coatomer_gsu_app_Ig-like_dom 626 771
IPR002553 Clathrin/coatomer_adapt-like_N 30 544
No external refs found!