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  5. Pp1s420_20V6

Pp1s420_20V6


Description : auxin efflux carrier auxin transport protein


Gene families : OG_42_0000399 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000399_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Physcomitrella release: Pp1s420_20V6
Cluster HCCA clusters: Cluster_43

Target Alias Description ECC score Gene Family Method Actions
A4A49_22594 No alias protein pin-likes 2 0.02 Orthogroups_2024-Update
At1g76530 No alias Protein PIN-LIKES 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9C9K4] 0.02 Orthogroups_2024-Update
Bradi4g37450 No alias Auxin efflux carrier family protein 0.02 Orthogroups_2024-Update
Brara.B02272.1 No alias auxin efflux transporter *(PILS) & auxin transporter *(PILS) 0.02 Orthogroups_2024-Update
Brara.G02181.1 No alias auxin efflux transporter *(PILS) & auxin transporter *(PILS) 0.02 Orthogroups_2024-Update
Brara.H00235.1 No alias auxin efflux transporter *(PILS) & auxin transporter *(PILS) 0.02 Orthogroups_2024-Update
Glyma.11G088600 No alias Auxin efflux carrier family protein 0.02 Orthogroups_2024-Update
HORVU5Hr1G087880.12 No alias auxin efflux transporter *(PILS) & auxin transporter *(PILS) 0.02 Orthogroups_2024-Update
LOC_Os08g09190 No alias auxin efflux carrier component, putative, expressed 0.02 Orthogroups_2024-Update
PSME_00012379-RA No alias (at5g65980 : 403.0) Auxin efflux carrier family protein;... 0.02 Orthogroups_2024-Update
Potri.005G099300 No alias Auxin efflux carrier family protein 0.02 Orthogroups_2024-Update
Sopen12g031650 No alias Membrane transport protein 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
CC GO:0016021 integral component of membrane IEA InterProScan predictions
BP GO:0055085 transmembrane transport IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003847 1-alkyl-2-acetylglycerophosphocholine esterase activity IEP Predicted GO
MF GO:0005506 iron ion binding IEP Predicted GO
MF GO:0010333 terpene synthase activity IEP Predicted GO
BP GO:0016042 lipid catabolic process IEP Predicted GO
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Predicted GO
MF GO:0020037 heme binding IEP Predicted GO
MF GO:0043169 cation binding IEP Predicted GO
MF GO:0046872 metal ion binding IEP Predicted GO
MF GO:0046906 tetrapyrrole binding IEP Predicted GO
MF GO:0046914 transition metal ion binding IEP Predicted GO
MF GO:0048037 cofactor binding IEP Predicted GO
MF GO:0051536 iron-sulfur cluster binding IEP Predicted GO
MF GO:0051540 metal cluster binding IEP Predicted GO
BP GO:0055114 oxidation-reduction process IEP Predicted GO
InterPro domains Description Start Stop
IPR004776 Mem_trans 30 421
No external refs found!