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  5. Pp1s421_1V6

Pp1s421_1V6


Description : seed maturation protein


Gene families : OG_42_0000160 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000160_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood Physcomitrella release: Pp1s421_1V6
Cluster HCCA clusters: Cluster_75

Target Alias Description ECC score Gene Family Method Actions
113819 No alias VIRB2-interacting protein 2 0.02 Orthogroups_2024-Update
96839 No alias Reticulon family protein 0.02 Orthogroups_2024-Update
At1g68230 No alias Reticulon-like protein [Source:UniProtKB/TrEMBL;Acc:A0A178WQE6] 0.02 Orthogroups_2024-Update
Brara.A01374.1 No alias ER-tubule curvature-inducing protein *(Reticulon) 0.03 Orthogroups_2024-Update
Glyma.07G097100 No alias Reticulon family protein 0.05 Orthogroups_2024-Update
Glyma.13G062400 No alias Reticulon family protein 0.03 Orthogroups_2024-Update
Glyma.20G128900 No alias Reticulon family protein 0.03 Orthogroups_2024-Update
LOC_Os01g53520 No alias reticulon domain containing protein, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os03g56900 No alias reticulon domain containing protein, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os05g24770 No alias reticulon domain containing protein, putative, expressed 0.03 Orthogroups_2024-Update
PSME_00019419-RA No alias (at3g10260 : 207.0) Reticulon family protein; CONTAINS... 0.02 Orthogroups_2024-Update
Potri.015G044300 No alias Reticulon family protein 0.02 Orthogroups_2024-Update
Seita.2G029000.1 No alias ER-tubule curvature-inducing protein *(Reticulon) 0.02 Orthogroups_2024-Update
Seita.5G383400.1 No alias ER-tubule curvature-inducing protein *(Reticulon) 0.02 Orthogroups_2024-Update
Sobic.009G260000.1 No alias ER-tubule curvature-inducing protein *(Reticulon) 0.03 Orthogroups_2024-Update
Solyc12g006290 No alias Reticulon-like protein (AHRD V3.3 *** M1CT78_SOLTU) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP Predicted GO
MF GO:0004347 glucose-6-phosphate isomerase activity IEP Predicted GO
BP GO:0005996 monosaccharide metabolic process IEP Predicted GO
BP GO:0006006 glucose metabolic process IEP Predicted GO
BP GO:0006094 gluconeogenesis IEP Predicted GO
BP GO:0006355 regulation of transcription, DNA-templated IEP Predicted GO
BP GO:0006811 ion transport IEP Predicted GO
BP GO:0006812 cation transport IEP Predicted GO
BP GO:0009889 regulation of biosynthetic process IEP Predicted GO
BP GO:0010468 regulation of gene expression IEP Predicted GO
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Predicted GO
MF GO:0016860 intramolecular oxidoreductase activity IEP Predicted GO
MF GO:0016861 intramolecular oxidoreductase activity, interconverting aldoses and ketoses IEP Predicted GO
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Predicted GO
BP GO:0019222 regulation of metabolic process IEP Predicted GO
BP GO:0019318 hexose metabolic process IEP Predicted GO
BP GO:0019319 hexose biosynthetic process IEP Predicted GO
BP GO:0030001 metal ion transport IEP Predicted GO
BP GO:0031323 regulation of cellular metabolic process IEP Predicted GO
BP GO:0031326 regulation of cellular biosynthetic process IEP Predicted GO
BP GO:0046364 monosaccharide biosynthetic process IEP Predicted GO
BP GO:0050789 regulation of biological process IEP Predicted GO
BP GO:0050794 regulation of cellular process IEP Predicted GO
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Predicted GO
BP GO:0051252 regulation of RNA metabolic process IEP Predicted GO
BP GO:0060255 regulation of macromolecule metabolic process IEP Predicted GO
BP GO:0080090 regulation of primary metabolic process IEP Predicted GO
MF GO:0140110 transcription regulator activity IEP Predicted GO
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Predicted GO
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Predicted GO
BP GO:2001141 regulation of RNA biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR003388 Reticulon 56 211
No external refs found!