1. Home
  2. Species
  3. Solanum lycopersicum
  4. Sequence
  5. Solyc11g073270

Solyc11g073270


Description : Pentatricopeptide repeat-containing protein (AHRD V3.3 *** A0A103XPT2_CYNCS)


Gene families : OG_42_0010531 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0010531_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc11g073270
Cluster HCCA clusters: Cluster_224


Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
CC GO:0000228 nuclear chromosome IEP Predicted GO
MF GO:0001882 nucleoside binding IEP Predicted GO
MF GO:0001883 purine nucleoside binding IEP Predicted GO
MF GO:0004057 arginyltransferase activity IEP Predicted GO
MF GO:0004129 cytochrome-c oxidase activity IEP Predicted GO
MF GO:0005525 GTP binding IEP Predicted GO
CC GO:0005694 chromosome IEP Predicted GO
CC GO:0005739 mitochondrion IEP Predicted GO
BP GO:0006338 chromatin remodeling IEP Predicted GO
BP GO:0006720 isoprenoid metabolic process IEP Predicted GO
BP GO:0008299 isoprenoid biosynthetic process IEP Predicted GO
MF GO:0015002 heme-copper terminal oxidase activity IEP Predicted GO
BP GO:0016598 protein arginylation IEP Predicted GO
MF GO:0016675 oxidoreductase activity, acting on a heme group of donors IEP Predicted GO
MF GO:0016676 oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor IEP Predicted GO
MF GO:0016755 transferase activity, transferring amino-acyl groups IEP Predicted GO
MF GO:0032549 ribonucleoside binding IEP Predicted GO
MF GO:0032550 purine ribonucleoside binding IEP Predicted GO
MF GO:0032561 guanyl ribonucleotide binding IEP Predicted GO
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 430 458
IPR002885 Pentatricopeptide_repeat 280 312
IPR002885 Pentatricopeptide_repeat 214 263
IPR002885 Pentatricopeptide_repeat 670 719
IPR002885 Pentatricopeptide_repeat 601 646
IPR002885 Pentatricopeptide_repeat 775 823
IPR002885 Pentatricopeptide_repeat 844 890
IPR002885 Pentatricopeptide_repeat 460 509
IPR002885 Pentatricopeptide_repeat 354 404
IPR002885 Pentatricopeptide_repeat 530 579
No external refs found!