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  5. Pp1s425_21V6

Pp1s425_21V6


Description : aspartic proteinase nepenthesin-1


Gene families : OG_42_0000019 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000019_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Physcomitrella release: Pp1s425_21V6
Cluster HCCA clusters: Cluster_179

Target Alias Description ECC score Gene Family Method Actions
A4A49_13745 No alias aspartic proteinase-like protein 2 0.04 Orthogroups_2024-Update
A4A49_26797 No alias aspartic proteinase cdr1 0.03 Orthogroups_2024-Update
GRMZM2G150059 No alias Eukaryotic aspartyl protease family protein 0.02 Orthogroups_2024-Update
Glyma.09G249300 No alias Eukaryotic aspartyl protease family protein 0.03 Orthogroups_2024-Update
HORVU2Hr1G078730.1 No alias A1-class (Pepsin) protease 0.02 Orthogroups_2024-Update
Mp6g05980.1 No alias pepsin-type protease 0.03 Orthogroups_2024-Update
Pp1s6_39V6 No alias chloroplast nucleoid dna binding protein 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP Predicted GO
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Predicted GO
BP GO:0000398 mRNA splicing, via spliceosome IEP Predicted GO
MF GO:0004097 catechol oxidase activity IEP Predicted GO
MF GO:0005507 copper ion binding IEP Predicted GO
BP GO:0006397 mRNA processing IEP Predicted GO
MF GO:0008131 primary amine oxidase activity IEP Predicted GO
BP GO:0008380 RNA splicing IEP Predicted GO
BP GO:0009308 amine metabolic process IEP Predicted GO
MF GO:0016638 oxidoreductase activity, acting on the CH-NH2 group of donors IEP Predicted GO
MF GO:0016641 oxidoreductase activity, acting on the CH-NH2 group of donors, oxygen as acceptor IEP Predicted GO
MF GO:0016679 oxidoreductase activity, acting on diphenols and related substances as donors IEP Predicted GO
MF GO:0016682 oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor IEP Predicted GO
CC GO:0030532 small nuclear ribonucleoprotein complex IEP Predicted GO
CC GO:0046540 U4/U6 x U5 tri-snRNP complex IEP Predicted GO
MF GO:0048038 quinone binding IEP Predicted GO
CC GO:0097525 spliceosomal snRNP complex IEP Predicted GO
CC GO:0097526 spliceosomal tri-snRNP complex IEP Predicted GO
CC GO:0120114 Sm-like protein family complex IEP Predicted GO
InterPro domains Description Start Stop
IPR032799 TAXi_C 79 237
No external refs found!