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  5. Solyc12g005310

Solyc12g005310


Description : Auxin-responsive GH3 family protein (AHRD V3.3 *** AT5G54510.1)


Gene families : OG_42_0000128 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000128_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc12g005310
Cluster HCCA clusters: Cluster_89

Target Alias Description ECC score Gene Family Method Actions
Brara.B00485.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Brara.B01373.1 No alias indole-3-acetic acid-amido synthetase *(GH3) 0.03 Orthogroups_2024-Update
Brara.I00224.1 No alias jasmonoyl-amino acid synthetase *(JAR1) 0.02 Orthogroups_2024-Update
Brara.I02972.1 No alias indole-3-acetic acid-amido synthetase *(GH3) 0.04 Orthogroups_2024-Update
GRMZM2G001421 No alias Auxin-responsive GH3 family protein 0.02 Orthogroups_2024-Update
Glyma.06G301000 No alias Auxin-responsive GH3 family protein 0.03 Orthogroups_2024-Update
Potri.002G206400 No alias putative indole-3-acetic acid-amido synthetase GH3.9 0.02 Orthogroups_2024-Update
Potri.003G161300 No alias Auxin-responsive GH3 family protein 0.03 Orthogroups_2024-Update
Solyc05g050290 No alias LOW QUALITY:Auxin-responsive GH3 family protein (AHRD... 0.03 Orthogroups_2024-Update
Solyc08g068490 No alias Auxin-responsive GH3 family protein (AHRD V3.3 *** AT4G03400.2) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004497 monooxygenase activity IEP Predicted GO
MF GO:0004499 N,N-dimethylaniline monooxygenase activity IEP Predicted GO
BP GO:0006397 mRNA processing IEP Predicted GO
BP GO:0009308 amine metabolic process IEP Predicted GO
CC GO:0009523 photosystem II IEP Predicted GO
CC GO:0009654 photosystem II oxygen evolving complex IEP Predicted GO
BP GO:0009690 cytokinin metabolic process IEP Predicted GO
BP GO:0010817 regulation of hormone levels IEP Predicted GO
BP GO:0016071 mRNA metabolic process IEP Predicted GO
MF GO:0016645 oxidoreductase activity, acting on the CH-NH group of donors IEP Predicted GO
MF GO:0016709 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen IEP Predicted GO
MF GO:0019139 cytokinin dehydrogenase activity IEP Predicted GO
CC GO:0019898 extrinsic component of membrane IEP Predicted GO
BP GO:0034754 cellular hormone metabolic process IEP Predicted GO
BP GO:0042445 hormone metabolic process IEP Predicted GO
MF GO:0050660 flavin adenine dinucleotide binding IEP Predicted GO
MF GO:0050661 NADP binding IEP Predicted GO
MF GO:0050662 coenzyme binding IEP Predicted GO
CC GO:1990204 oxidoreductase complex IEP Predicted GO
InterPro domains Description Start Stop
IPR004993 GH3 22 574
No external refs found!