1. Home
  2. Species
  3. Physcomitrella patens
  4. Sequence
  5. Pp1s441_8V6

Pp1s441_8V6


Description : zinc ion binding


Gene families : OG_42_0000211 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000211_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Physcomitrella release: Pp1s441_8V6
Cluster HCCA clusters: Cluster_264

Target Alias Description ECC score Gene Family Method Actions
A4A49_35786 No alias hypothetical protein 0.05 Orthogroups_2024-Update
At1g32700 No alias PLATZ transcription factor family protein... 0.02 Orthogroups_2024-Update
At5g46710 No alias At5g46710 [Source:UniProtKB/TrEMBL;Acc:Q9FIQ4] 0.03 Orthogroups_2024-Update
Brara.B02917.1 No alias PLATZ-type transcription factor 0.03 Orthogroups_2024-Update
Brara.G03455.1 No alias PLATZ-type transcription factor 0.03 Orthogroups_2024-Update
Brara.I02755.1 No alias PLATZ-type transcription factor 0.03 Orthogroups_2024-Update
Glyma.01G078600 No alias PLATZ transcription factor family protein 0.03 Orthogroups_2024-Update
Glyma.09G205300 No alias PLATZ transcription factor family protein 0.03 Orthogroups_2024-Update
Glyma.19G188200 No alias PLATZ transcription factor family protein 0.03 Orthogroups_2024-Update
HORVU7Hr1G093120.4 No alias PLATZ-type transcription factor 0.04 Orthogroups_2024-Update
LOC_Os02g46610 No alias zinc-binding protein, putative, expressed 0.02 Orthogroups_2024-Update
Seita.6G250600.1 No alias PLATZ-type transcription factor 0.02 Orthogroups_2024-Update
Solyc08g076860 No alias PLATZ transcription factor family protein (AHRD V3.3 ***... 0.02 Orthogroups_2024-Update
Sopen08g001120 No alias PLATZ transcription factor 0.03 Orthogroups_2024-Update
Sopen08g025390 No alias PLATZ transcription factor 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0005096 GTPase activator activity IEP Predicted GO
CC GO:0005667 transcription factor complex IEP Predicted GO
CC GO:0005669 transcription factor TFIID complex IEP Predicted GO
BP GO:0006139 nucleobase-containing compound metabolic process IEP Predicted GO
BP GO:0006281 DNA repair IEP Predicted GO
BP GO:0006284 base-excision repair IEP Predicted GO
BP GO:0006352 DNA-templated transcription, initiation IEP Predicted GO
BP GO:0006725 cellular aromatic compound metabolic process IEP Predicted GO
BP GO:0006974 cellular response to DNA damage stimulus IEP Predicted GO
MF GO:0008047 enzyme activator activity IEP Predicted GO
MF GO:0030234 enzyme regulator activity IEP Predicted GO
MF GO:0030695 GTPase regulator activity IEP Predicted GO
BP GO:0033554 cellular response to stress IEP Predicted GO
CC GO:0044428 nuclear part IEP Predicted GO
CC GO:0044451 nucleoplasm part IEP Predicted GO
CC GO:0044798 nuclear transcription factor complex IEP Predicted GO
BP GO:0046483 heterocycle metabolic process IEP Predicted GO
BP GO:0051716 cellular response to stimulus IEP Predicted GO
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP Predicted GO
BP GO:0090304 nucleic acid metabolic process IEP Predicted GO
CC GO:0090575 RNA polymerase II transcription factor complex IEP Predicted GO
MF GO:0098772 molecular function regulator IEP Predicted GO
BP GO:1901360 organic cyclic compound metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR006734 DUF597 67 138
No external refs found!