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  5. Solyc12g005490

Solyc12g005490


Description : LOW QUALITY:transmembrane protein, putative (DUF679 domain membrane protein 7) (AHRD V3.3 *** AT4G28485.2)


Gene families : OG_42_0000299 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000299_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc12g005490
Cluster HCCA clusters: Cluster_64

Target Alias Description ECC score Gene Family Method Actions
At3g21550 No alias DMP2 [Source:UniProtKB/TrEMBL;Acc:A0A178VDX9] 0.03 Orthogroups_2024-Update
GRMZM2G333923 No alias Protein of unknown function (DUF679) 0.05 Orthogroups_2024-Update
Glyma.07G201500 No alias Protein of unknown function (DUF679) 0.02 Orthogroups_2024-Update
Glyma.09G237500 No alias Protein of unknown function (DUF679) 0.02 Orthogroups_2024-Update
Glyma.17G020900 No alias DUF679 domain membrane protein 2 0.03 Orthogroups_2024-Update
HORVU7Hr1G119710.1 No alias Unknown function 0.02 Orthogroups_2024-Update
MA_9964484g0010 No alias (at5g46090 : 158.0) Protein of unknown function... 0.03 Orthogroups_2024-Update
Seita.5G176800.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.010G097800.1 No alias Unknown function 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP Predicted GO
MF GO:0003993 acid phosphatase activity IEP Predicted GO
MF GO:0004175 endopeptidase activity IEP Predicted GO
MF GO:0004252 serine-type endopeptidase activity IEP Predicted GO
BP GO:0006351 transcription, DNA-templated IEP Predicted GO
BP GO:0006508 proteolysis IEP Predicted GO
MF GO:0008233 peptidase activity IEP Predicted GO
MF GO:0008236 serine-type peptidase activity IEP Predicted GO
MF GO:0016779 nucleotidyltransferase activity IEP Predicted GO
MF GO:0017171 serine hydrolase activity IEP Predicted GO
BP GO:0032774 RNA biosynthetic process IEP Predicted GO
MF GO:0034062 5'-3' RNA polymerase activity IEP Predicted GO
MF GO:0070011 peptidase activity, acting on L-amino acid peptides IEP Predicted GO
BP GO:0070647 protein modification by small protein conjugation or removal IEP Predicted GO
BP GO:0097659 nucleic acid-templated transcription IEP Predicted GO
MF GO:0097747 RNA polymerase activity IEP Predicted GO
MF GO:0140098 catalytic activity, acting on RNA IEP Predicted GO
InterPro domains Description Start Stop
IPR007770 DMP 60 220
No external refs found!