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  5. Pp1s446_3V6

Pp1s446_3V6


Description : pectin methylesterase


Gene families : OG_42_0000087 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000087_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Physcomitrella release: Pp1s446_3V6
Cluster HCCA clusters: Cluster_26

Target Alias Description ECC score Gene Family Method Actions
73566 No alias Pectin lyase-like superfamily protein 0.03 Orthogroups_2024-Update
At5g47500 No alias Probable pectinesterase 68... 0.02 Orthogroups_2024-Update
Glyma.01G209500 No alias Pectin lyase-like superfamily protein 0.04 Orthogroups_2024-Update
Glyma.07G125100 No alias Pectin lyase-like superfamily protein 0.03 Orthogroups_2024-Update
Glyma.14G014500 No alias Pectin lyase-like superfamily protein 0.04 Orthogroups_2024-Update
Glyma.19G145700 No alias Pectin lyase-like superfamily protein 0.03 Orthogroups_2024-Update
HORVU2Hr1G032220.4 No alias pectin methylesterase 0.02 Orthogroups_2024-Update
HORVU4Hr1G028810.4 No alias pectin methylesterase 0.03 Orthogroups_2024-Update
LOC_Os03g19610 No alias pectinesterase, putative, expressed 0.02 Orthogroups_2024-Update
MA_10428610g0020 No alias (at5g19730 : 384.0) Pectin lyase-like superfamily... 0.02 Orthogroups_2024-Update
Mp2g01420.1 No alias pectin methylesterase 0.02 Orthogroups_2024-Update
PSME_00022123-RA No alias (at3g29090 : 421.0) Encodes an atypical pectin... 0.02 Orthogroups_2024-Update
Pp1s112_177V6 No alias pectin methylesterase 0.04 Orthogroups_2024-Update
Seita.5G313900.1 No alias pectin methylesterase 0.02 Orthogroups_2024-Update
Sobic.003G143600.1 No alias pectin methylesterase 0.02 Orthogroups_2024-Update
Solyc04g080530 No alias Pectinesterase (AHRD V3.3 *** K4BVD2_SOLLC) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0030599 pectinesterase activity IEA InterProScan predictions
BP GO:0042545 cell wall modification IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003856 3-dehydroquinate synthase activity IEP Predicted GO
MF GO:0004601 peroxidase activity IEP Predicted GO
MF GO:0005096 GTPase activator activity IEP Predicted GO
BP GO:0006629 lipid metabolic process IEP Predicted GO
BP GO:0006650 glycerophospholipid metabolic process IEP Predicted GO
BP GO:0006812 cation transport IEP Predicted GO
BP GO:0006950 response to stress IEP Predicted GO
BP GO:0006979 response to oxidative stress IEP Predicted GO
MF GO:0008047 enzyme activator activity IEP Predicted GO
BP GO:0009072 aromatic amino acid family metabolic process IEP Predicted GO
BP GO:0009073 aromatic amino acid family biosynthetic process IEP Predicted GO
MF GO:0016209 antioxidant activity IEP Predicted GO
MF GO:0016307 phosphatidylinositol phosphate kinase activity IEP Predicted GO
MF GO:0016491 oxidoreductase activity IEP Predicted GO
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP Predicted GO
MF GO:0016835 carbon-oxygen lyase activity IEP Predicted GO
MF GO:0016838 carbon-oxygen lyase activity, acting on phosphates IEP Predicted GO
MF GO:0020037 heme binding IEP Predicted GO
BP GO:0030001 metal ion transport IEP Predicted GO
MF GO:0030695 GTPase regulator activity IEP Predicted GO
BP GO:0046486 glycerolipid metabolic process IEP Predicted GO
BP GO:0046488 phosphatidylinositol metabolic process IEP Predicted GO
MF GO:0046906 tetrapyrrole binding IEP Predicted GO
BP GO:0050896 response to stimulus IEP Predicted GO
BP GO:0055114 oxidation-reduction process IEP Predicted GO
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP Predicted GO
InterPro domains Description Start Stop
IPR000070 Pectinesterase_cat 278 401
IPR000070 Pectinesterase_cat 92 254
No external refs found!