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  5. Solyc12g005630

Solyc12g005630


Description : Cytochrome b6-f complex iron-sulfur subunit (AHRD V3.3 *** K4DBA1_SOLLC)


Gene families : OG_42_0006092 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0006092_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc12g005630
Cluster HCCA clusters: Cluster_12

Target Alias Description ECC score Gene Family Method Actions
166088 No alias photosynthetic electron transfer C 0.03 Orthogroups_2024-Update
At4g03280 No alias Cytochrome b6-f complex iron-sulfur subunit,... 0.04 Orthogroups_2024-Update
Cre11.g467689 No alias photosynthetic electron transfer C 0.04 Orthogroups_2024-Update
Glyma.12G199400 No alias photosynthetic electron transfer C 0.07 Orthogroups_2024-Update
Glyma.13G302900 No alias photosynthetic electron transfer C 0.06 Orthogroups_2024-Update
HORVU2Hr1G041610.4 No alias EC_1.10 oxidoreductase acting on diphenol or related... 0.04 Orthogroups_2024-Update
Kfl00433_0020 kfl00433_0020_v1.1 (q69gy7|ucria_soltu : 223.0) Cytochrome b6-f complex... 0.03 Orthogroups_2024-Update
LOC_Os07g37030 No alias cytochrome b6-f complex iron-sulfur subunit, chloroplast... 0.02 Orthogroups_2024-Update
Mp2g07880.1 No alias Rieske iron-sulfur component PetC of cytochrome b6/f complex 0.04 Orthogroups_2024-Update
Potri.019G118500 No alias photosynthetic electron transfer C 0.03 Orthogroups_2024-Update
Pp1s35_78V6 No alias cytochrome b6-f complex iron-sulfur subunit 0.09 Orthogroups_2024-Update
Seita.1G016500.1 No alias EC_1.10 oxidoreductase acting on diphenol or related... 0.06 Orthogroups_2024-Update
Sobic.009G143100.1 No alias EC_1.10 oxidoreductase acting on diphenol or related... 0.07 Orthogroups_2024-Update
Sopen12g001560 No alias Cytochrome B6-F complex Fe-S subunit 0.11 Orthogroups_2024-Update
evm.model.tig00000970.19 No alias (q9sbn3|ucria_volca : 214.0) Cytochrome b6-f complex... 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0009496 plastoquinol--plastocyanin reductase activity IEA InterProScan predictions
MF GO:0016491 oxidoreductase activity IEA InterProScan predictions
CC GO:0042651 thylakoid membrane IEA InterProScan predictions
MF GO:0051537 2 iron, 2 sulfur cluster binding IEA InterProScan predictions
BP GO:0055114 oxidation-reduction process IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0004089 carbonate dehydratase activity IEP Predicted GO
MF GO:0004222 metalloendopeptidase activity IEP Predicted GO
MF GO:0004618 phosphoglycerate kinase activity IEP Predicted GO
MF GO:0004807 triose-phosphate isomerase activity IEP Predicted GO
BP GO:0006096 glycolytic process IEP Predicted GO
BP GO:0006757 ATP generation from ADP IEP Predicted GO
MF GO:0008237 metallopeptidase activity IEP Predicted GO
BP GO:0009135 purine nucleoside diphosphate metabolic process IEP Predicted GO
BP GO:0009179 purine ribonucleoside diphosphate metabolic process IEP Predicted GO
BP GO:0009185 ribonucleoside diphosphate metabolic process IEP Predicted GO
CC GO:0009512 cytochrome b6f complex IEP Predicted GO
MF GO:0015291 secondary active transmembrane transporter activity IEP Predicted GO
MF GO:0015297 antiporter activity IEP Predicted GO
MF GO:0015298 solute:cation antiporter activity IEP Predicted GO
MF GO:0015299 solute:proton antiporter activity IEP Predicted GO
BP GO:0016226 iron-sulfur cluster assembly IEP Predicted GO
MF GO:0016774 phosphotransferase activity, carboxyl group as acceptor IEP Predicted GO
MF GO:0016836 hydro-lyase activity IEP Predicted GO
MF GO:0016860 intramolecular oxidoreductase activity IEP Predicted GO
MF GO:0016861 intramolecular oxidoreductase activity, interconverting aldoses and ketoses IEP Predicted GO
MF GO:0022804 active transmembrane transporter activity IEP Predicted GO
BP GO:0031163 metallo-sulfur cluster assembly IEP Predicted GO
BP GO:0042866 pyruvate biosynthetic process IEP Predicted GO
BP GO:0046031 ADP metabolic process IEP Predicted GO
BP GO:0051186 cofactor metabolic process IEP Predicted GO
BP GO:0055085 transmembrane transport IEP Predicted GO
CC GO:0070069 cytochrome complex IEP Predicted GO
InterPro domains Description Start Stop
IPR017941 Rieske_2Fe-2S 136 200
IPR014909 Cyt_b6-f_cplx_Fe-S_su 60 98
No external refs found!