1. Home
  2. Species
  3. Solanum lycopersicum
  4. Sequence
  5. Solyc12g005640

Solyc12g005640


Description : R2R3MYB transcription factor 68


Gene families : OG_42_0000002 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc12g005640
Cluster HCCA clusters: Cluster_16

Target Alias Description ECC score Gene Family Method Actions
A4A49_11057 No alias transcription factor myb86 0.04 Orthogroups_2024-Update
Bradi3g52260 No alias myb domain protein 58 0.03 Orthogroups_2024-Update
Brara.A03255.1 No alias MYB class-R2R3 transcription factor 0.03 Orthogroups_2024-Update
Brara.B01492.1 No alias MYB class-R2R3 transcription factor 0.03 Orthogroups_2024-Update
Brara.H02857.1 No alias MYB class-R2R3 subgroup-1 transcription factor 0.03 Orthogroups_2024-Update
GRMZM2G041415 No alias myb domain protein 4 0.04 Orthogroups_2024-Update
Glyma.06G300200 No alias myb domain protein 14 0.03 Orthogroups_2024-Update
Glyma.07G228600 No alias myb domain protein 16 0.03 Orthogroups_2024-Update
Glyma.11G045400 No alias myb domain protein 84 0.02 Orthogroups_2024-Update
Glyma.13G322900 No alias myb domain protein 36 0.03 Orthogroups_2024-Update
Glyma.19G218800 No alias myb domain protein 2 0.03 Orthogroups_2024-Update
HORVU2Hr1G106400.3 No alias MYB class-R2R3 subgroup-3 transcription factor & MYB... 0.03 Orthogroups_2024-Update
HORVU6Hr1G060610.3 No alias MYB class-R2R3 subgroup-16 transcription factor &... 0.04 Orthogroups_2024-Update
HORVU7Hr1G037060.3 No alias MYB class-R2R3 subgroup-10/24 transcription factor 0.02 Orthogroups_2024-Update
LOC_Os01g36460 No alias MYB family transcription factor, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os04g39470 No alias MYB family transcription factor, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os06g46560 No alias myb-like DNA-binding domain containing protein, expressed 0.03 Orthogroups_2024-Update
Potri.006G122100 No alias myb domain protein 27 0.02 Orthogroups_2024-Update
Potri.012G127700 No alias myb domain protein 42 0.02 Orthogroups_2024-Update
Sobic.004G248700.1 No alias MYB class-R2R3 transcription factor 0.03 Orthogroups_2024-Update
Sobic.005G062000.2 No alias MYB class-R2R3 subgroup-4 transcription factor 0.03 Orthogroups_2024-Update
Solyc02g093740 No alias R2R3MYB transcription factor 99 0.04 Orthogroups_2024-Update
Solyc04g077260 No alias blind-like3 0.03 Orthogroups_2024-Update
Sopen05g031840 No alias Myb-like DNA-binding domain 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000723 telomere maintenance IEP Predicted GO
MF GO:0004616 phosphogluconate dehydrogenase (decarboxylating) activity IEP Predicted GO
MF GO:0004866 endopeptidase inhibitor activity IEP Predicted GO
BP GO:0006486 protein glycosylation IEP Predicted GO
MF GO:0008378 galactosyltransferase activity IEP Predicted GO
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Predicted GO
MF GO:0016758 transferase activity, transferring hexosyl groups IEP Predicted GO
MF GO:0030414 peptidase inhibitor activity IEP Predicted GO
BP GO:0032200 telomere organization IEP Predicted GO
BP GO:0043413 macromolecule glycosylation IEP Predicted GO
BP GO:0060249 anatomical structure homeostasis IEP Predicted GO
MF GO:0061134 peptidase regulator activity IEP Predicted GO
MF GO:0061135 endopeptidase regulator activity IEP Predicted GO
BP GO:0070085 glycosylation IEP Predicted GO
InterPro domains Description Start Stop
IPR001005 SANT/Myb 68 111
IPR001005 SANT/Myb 15 62
No external refs found!