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  5. Pp1s455_5V6

Pp1s455_5V6


Description : zinc finger (c3hc4-type ring finger) family protein


Gene families : OG_42_0000832 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000832_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Physcomitrella release: Pp1s455_5V6

Target Alias Description ECC score Gene Family Method Actions
A4A49_06298 No alias putative e3 ubiquitin-protein ligase rhb1a 0.02 Orthogroups_2024-Update
At4g23450 No alias RING/U-box superfamily protein... 0.02 Orthogroups_2024-Update
Brara.A01345.1 No alias E3 ubiquitin ligase *(AIRP1) 0.03 Orthogroups_2024-Update
Brara.C04683.1 No alias E3 ubiquitin ligase *(AIRP1) 0.01 Orthogroups_2024-Update
Brara.G02490.1 No alias E3 ubiquitin ligase *(AIRP1) 0.03 Orthogroups_2024-Update
Glyma.01G221000 No alias RING/U-box superfamily protein 0.02 Orthogroups_2024-Update
Glyma.09G257100 No alias RING-H2 finger B1A 0.03 Orthogroups_2024-Update
HORVU3Hr1G096040.3 No alias E3 ubiquitin ligase *(AIRP1) 0.03 Orthogroups_2024-Update
LOC_Os01g70160 No alias zinc finger, C3HC4 type domain containing protein, expressed 0.03 Orthogroups_2024-Update
LOC_Os03g40170 No alias zinc finger, C3HC4 type domain containing protein, expressed 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP Predicted GO
MF GO:0003676 nucleic acid binding IEP Predicted GO
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP Predicted GO
MF GO:0016853 isomerase activity IEP Predicted GO
MF GO:0016859 cis-trans isomerase activity IEP Predicted GO
BP GO:0018193 peptidyl-amino acid modification IEP Predicted GO
BP GO:0018208 peptidyl-proline modification IEP Predicted GO
InterPro domains Description Start Stop
IPR001841 Znf_RING 191 232
No external refs found!