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  5. Pp1s45_249V6

Pp1s45_249V6


Description : pectin methylesterase


Gene families : OG_42_0000087 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000087_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Physcomitrella release: Pp1s45_249V6
Cluster HCCA clusters: Cluster_108

Target Alias Description ECC score Gene Family Method Actions
73566 No alias Pectin lyase-like superfamily protein 0.02 Orthogroups_2024-Update
76693 No alias Pectin lyase-like superfamily protein 0.02 Orthogroups_2024-Update
81583 No alias Pectin lyase-like superfamily protein 0.02 Orthogroups_2024-Update
A4A49_15905 No alias putative pectinesterase 8 0.03 Orthogroups_2024-Update
At2g47280 No alias Probable pectinesterase 66... 0.03 Orthogroups_2024-Update
At5g07410 No alias Probable pectinesterase 48... 0.03 Orthogroups_2024-Update
At5g07420 No alias Probable pectinesterase 49... 0.02 Orthogroups_2024-Update
At5g07430 No alias Probable pectinesterase 50... 0.02 Orthogroups_2024-Update
At5g47500 No alias Probable pectinesterase 68... 0.03 Orthogroups_2024-Update
At5g55590 No alias Pectinesterase QRT1 [Source:UniProtKB/Swiss-Prot;Acc:Q9FM79] 0.02 Orthogroups_2024-Update
Bradi1g21810 No alias Pectin lyase-like superfamily protein 0.04 Orthogroups_2024-Update
Bradi2g44500 No alias pectinesterase 11 0.03 Orthogroups_2024-Update
Bradi4g00840 No alias Pectin lyase-like superfamily protein 0.02 Orthogroups_2024-Update
Brara.B03357.1 No alias pectin methylesterase 0.03 Orthogroups_2024-Update
GRMZM2G120779 No alias Pectin lyase-like superfamily protein 0.02 Orthogroups_2024-Update
Glyma.01G006800 No alias Pectin lyase-like superfamily protein 0.03 Orthogroups_2024-Update
Glyma.01G209500 No alias Pectin lyase-like superfamily protein 0.03 Orthogroups_2024-Update
Glyma.02G294700 No alias Pectin lyase-like superfamily protein 0.03 Orthogroups_2024-Update
Glyma.07G125100 No alias Pectin lyase-like superfamily protein 0.02 Orthogroups_2024-Update
Glyma.08G033000 No alias Pectin lyase-like superfamily protein 0.03 Orthogroups_2024-Update
HORVU1Hr1G048280.2 No alias pectin methylesterase 0.02 Orthogroups_2024-Update
HORVU2Hr1G032220.4 No alias pectin methylesterase 0.05 Orthogroups_2024-Update
LOC_Os08g12410 No alias pectinesterase, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os09g39760 No alias pectinesterase, putative, expressed 0.03 Orthogroups_2024-Update
MA_10267810g0010 No alias (at5g47500 : 480.0) Pectin lyase-like superfamily... 0.02 Orthogroups_2024-Update
MA_28575g0010 No alias (at5g47500 : 447.0) Pectin lyase-like superfamily... 0.03 Orthogroups_2024-Update
MA_6149868g0010 No alias (at2g36710 : 275.0) Pectin lyase-like superfamily... 0.04 Orthogroups_2024-Update
PSME_00014679-RA No alias (at5g19730 : 298.0) Pectin lyase-like superfamily... 0.02 Orthogroups_2024-Update
PSME_00020051-RA No alias (at5g19730 : 262.0) Pectin lyase-like superfamily... 0.02 Orthogroups_2024-Update
PSME_00022041-RA No alias (at5g55590 : 238.0) Encodes a protein with pectin... 0.02 Orthogroups_2024-Update
PSME_00045931-RA No alias (at5g47500 : 448.0) Pectin lyase-like superfamily... 0.02 Orthogroups_2024-Update
Potri.004G033700 No alias Pectin lyase-like superfamily protein 0.03 Orthogroups_2024-Update
Potri.004G156300 No alias pectinesterase 11 0.03 Orthogroups_2024-Update
Potri.006G137100 No alias Pectin lyase-like superfamily protein 0.02 Orthogroups_2024-Update
Potri.006G186000 No alias Pectin lyase-like superfamily protein 0.05 Orthogroups_2024-Update
Potri.007G015700 No alias Pectin lyase-like superfamily protein 0.03 Orthogroups_2024-Update
Potri.008G104800 No alias Pectin lyase-like superfamily protein 0.02 Orthogroups_2024-Update
Potri.013G008100 No alias Pectin lyase-like superfamily protein 0.02 Orthogroups_2024-Update
Potri.014G117100 No alias Pectin lyase-like superfamily protein 0.03 Orthogroups_2024-Update
Potri.016G017700 No alias Pectin lyase-like superfamily protein 0.02 Orthogroups_2024-Update
Potri.018G068400 No alias Pectin lyase-like superfamily protein 0.02 Orthogroups_2024-Update
Pp1s175_19V6 No alias pectin methylesterase 0.05 Orthogroups_2024-Update
Pp1s198_26V6 No alias pectin methylesterase 0.03 Orthogroups_2024-Update
Pp1s461_15V6 No alias pectin methylesterase 0.03 Orthogroups_2024-Update
Seita.5G027700.1 No alias pectin methylesterase 0.02 Orthogroups_2024-Update
Seita.5G313900.1 No alias pectin methylesterase 0.02 Orthogroups_2024-Update
Solyc04g080530 No alias Pectinesterase (AHRD V3.3 *** K4BVD2_SOLLC) 0.02 Orthogroups_2024-Update
Solyc09g091730 No alias Pectinesterase (AHRD V3.3 *** K4CWJ9_SOLLC) 0.04 Orthogroups_2024-Update
Solyc10g083810 No alias No description available 0.02 Orthogroups_2024-Update
Solyc12g008530 No alias Pectinesterase (AHRD V3.3 *** K4DBU1_SOLLC) 0.03 Orthogroups_2024-Update
Sopen07g022810 No alias Pectinesterase 0.02 Orthogroups_2024-Update
Sopen09g034620 No alias Pectinesterase 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0030599 pectinesterase activity IEA InterProScan predictions
BP GO:0042545 cell wall modification IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0000096 sulfur amino acid metabolic process IEP Predicted GO
CC GO:0000148 1,3-beta-D-glucan synthase complex IEP Predicted GO
MF GO:0003843 1,3-beta-D-glucan synthase activity IEP Predicted GO
MF GO:0003885 D-arabinono-1,4-lactone oxidase activity IEP Predicted GO
MF GO:0004489 methylenetetrahydrofolate reductase (NAD(P)H) activity IEP Predicted GO
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Predicted GO
MF GO:0004601 peroxidase activity IEP Predicted GO
MF GO:0004615 phosphomannomutase activity IEP Predicted GO
CC GO:0005575 cellular_component IEP Predicted GO
CC GO:0005576 extracellular region IEP Predicted GO
CC GO:0005618 cell wall IEP Predicted GO
BP GO:0005975 carbohydrate metabolic process IEP Predicted GO
BP GO:0005976 polysaccharide metabolic process IEP Predicted GO
BP GO:0005991 trehalose metabolic process IEP Predicted GO
BP GO:0005992 trehalose biosynthetic process IEP Predicted GO
BP GO:0006073 cellular glucan metabolic process IEP Predicted GO
BP GO:0006074 (1->3)-beta-D-glucan metabolic process IEP Predicted GO
BP GO:0006075 (1->3)-beta-D-glucan biosynthetic process IEP Predicted GO
BP GO:0006082 organic acid metabolic process IEP Predicted GO
BP GO:0006555 methionine metabolic process IEP Predicted GO
BP GO:0006631 fatty acid metabolic process IEP Predicted GO
BP GO:0006633 fatty acid biosynthetic process IEP Predicted GO
BP GO:0006979 response to oxidative stress IEP Predicted GO
BP GO:0008152 metabolic process IEP Predicted GO
BP GO:0008610 lipid biosynthetic process IEP Predicted GO
BP GO:0009066 aspartate family amino acid metabolic process IEP Predicted GO
BP GO:0009225 nucleotide-sugar metabolic process IEP Predicted GO
BP GO:0009226 nucleotide-sugar biosynthetic process IEP Predicted GO
BP GO:0009298 GDP-mannose biosynthetic process IEP Predicted GO
CC GO:0016020 membrane IEP Predicted GO
BP GO:0016051 carbohydrate biosynthetic process IEP Predicted GO
MF GO:0016209 antioxidant activity IEP Predicted GO
MF GO:0016645 oxidoreductase activity, acting on the CH-NH group of donors IEP Predicted GO
MF GO:0016646 oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor IEP Predicted GO
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP Predicted GO
MF GO:0016740 transferase activity IEP Predicted GO
MF GO:0016746 transferase activity, transferring acyl groups IEP Predicted GO
MF GO:0016747 transferase activity, transferring acyl groups other than amino-acyl groups IEP Predicted GO
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Predicted GO
MF GO:0016758 transferase activity, transferring hexosyl groups IEP Predicted GO
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP Predicted GO
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Predicted GO
MF GO:0016853 isomerase activity IEP Predicted GO
MF GO:0016868 intramolecular transferase activity, phosphotransferases IEP Predicted GO
MF GO:0016899 oxidoreductase activity, acting on the CH-OH group of donors, oxygen as acceptor IEP Predicted GO
BP GO:0019673 GDP-mannose metabolic process IEP Predicted GO
BP GO:0019752 carboxylic acid metabolic process IEP Predicted GO
MF GO:0020037 heme binding IEP Predicted GO
CC GO:0030312 external encapsulating structure IEP Predicted GO
BP GO:0032787 monocarboxylic acid metabolic process IEP Predicted GO
BP GO:0034637 cellular carbohydrate biosynthetic process IEP Predicted GO
BP GO:0043170 macromolecule metabolic process IEP Predicted GO
BP GO:0043436 oxoacid metabolic process IEP Predicted GO
BP GO:0044042 glucan metabolic process IEP Predicted GO
BP GO:0044237 cellular metabolic process IEP Predicted GO
BP GO:0044238 primary metabolic process IEP Predicted GO
BP GO:0044255 cellular lipid metabolic process IEP Predicted GO
BP GO:0044260 cellular macromolecule metabolic process IEP Predicted GO
BP GO:0044262 cellular carbohydrate metabolic process IEP Predicted GO
BP GO:0044264 cellular polysaccharide metabolic process IEP Predicted GO
BP GO:0044281 small molecule metabolic process IEP Predicted GO
CC GO:0044459 plasma membrane part IEP Predicted GO
BP GO:0046351 disaccharide biosynthetic process IEP Predicted GO
MF GO:0046527 glucosyltransferase activity IEP Predicted GO
MF GO:0046906 tetrapyrrole binding IEP Predicted GO
MF GO:0048037 cofactor binding IEP Predicted GO
CC GO:0048046 apoplast IEP Predicted GO
BP GO:0055114 oxidation-reduction process IEP Predicted GO
BP GO:0071704 organic substance metabolic process IEP Predicted GO
BP GO:0072330 monocarboxylic acid biosynthetic process IEP Predicted GO
CC GO:0098797 plasma membrane protein complex IEP Predicted GO
InterPro domains Description Start Stop
IPR000070 Pectinesterase_cat 57 340
No external refs found!