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  5. Pp1s45_64V6

Pp1s45_64V6


Description : 60s ribosomal protein


Gene families : OG_42_0001366 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001366_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Physcomitrella release: Pp1s45_64V6
Cluster HCCA clusters: Cluster_61

Target Alias Description ECC score Gene Family Method Actions
Brara.B02119.1 No alias component *(eL33) of large ribosomal-subunit (LSU) proteome 0.03 Orthogroups_2024-Update
Brara.G03191.1 No alias component *(eL33) of large ribosomal-subunit (LSU) proteome 0.03 Orthogroups_2024-Update
Glyma.08G087000 No alias Ribosomal protein L35Ae family protein 0.03 Orthogroups_2024-Update
Kfl00148_0220 kfl00148_0220_v1.1 (at3g55750 : 81.6) Ribosomal protein L35Ae family... 0.02 Orthogroups_2024-Update
Pp1s52_116V6 No alias 60s ribosomal protein 0.03 Orthogroups_2024-Update
Seita.4G043000.1 No alias component *(eL33) of large ribosomal-subunit (LSU) proteome 0.03 Orthogroups_2024-Update
Solyc03g096360 No alias 60S ribosomal protein L35a (AHRD V3.3 *** B6VC50_VERFO) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA InterProScan predictions
CC GO:0005622 intracellular IEA InterProScan predictions
CC GO:0005840 ribosome IEA InterProScan predictions
BP GO:0006412 translation IEA InterProScan predictions
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Type GO Term Name Evidence Source
CC GO:0000813 ESCRT I complex IEP Predicted GO
BP GO:0016197 endosomal transport IEP Predicted GO
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP Predicted GO
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP Predicted GO
MF GO:0019843 rRNA binding IEP Predicted GO
BP GO:0032509 endosome transport via multivesicular body sorting pathway IEP Predicted GO
CC GO:0036452 ESCRT complex IEP Predicted GO
CC GO:0044433 cytoplasmic vesicle part IEP Predicted GO
CC GO:0044440 endosomal part IEP Predicted GO
MF GO:0045735 nutrient reservoir activity IEP Predicted GO
MF GO:0051213 dioxygenase activity IEP Predicted GO
BP GO:0071985 multivesicular body sorting pathway IEP Predicted GO
InterPro domains Description Start Stop
IPR001780 Ribosomal_L35A 11 105
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