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  5. Solyc12g006120

Solyc12g006120


Description : Nuclear transcription factor Y protein (AHRD V3.3 *** G7K4Q5_MEDTR)


Gene families : OG_42_0000232 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000232_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc12g006120
Cluster HCCA clusters: Cluster_22

Target Alias Description ECC score Gene Family Method Actions
At5g47640 No alias Nuclear transcription factor Y subunit B-2... 0.03 Orthogroups_2024-Update
Brara.A03094.1 No alias component *(NF-YB) of NF-Y transcription factor complex 0.03 Orthogroups_2024-Update
Brara.C03591.1 No alias component *(NF-YB) of NF-Y transcription factor complex 0.03 Orthogroups_2024-Update
Brara.E02549.1 No alias component *(NF-YB) of NF-Y transcription factor complex 0.03 Orthogroups_2024-Update
GRMZM5G804893 No alias nuclear factor Y, subunit B8 0.03 Orthogroups_2024-Update
Potri.013G019500 No alias nuclear factor Y, subunit B4 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000151 ubiquitin ligase complex IEP Predicted GO
CC GO:0000152 nuclear ubiquitin ligase complex IEP Predicted GO
BP GO:0000272 polysaccharide catabolic process IEP Predicted GO
CC GO:0000786 nucleosome IEP Predicted GO
MF GO:0003676 nucleic acid binding IEP Predicted GO
MF GO:0003677 DNA binding IEP Predicted GO
MF GO:0004190 aspartic-type endopeptidase activity IEP Predicted GO
CC GO:0005634 nucleus IEP Predicted GO
CC GO:0005680 anaphase-promoting complex IEP Predicted GO
BP GO:0006325 chromatin organization IEP Predicted GO
MF GO:0008234 cysteine-type peptidase activity IEP Predicted GO
MF GO:0010181 FMN binding IEP Predicted GO
MF GO:0016160 amylase activity IEP Predicted GO
MF GO:0016161 beta-amylase activity IEP Predicted GO
MF GO:0016307 phosphatidylinositol phosphate kinase activity IEP Predicted GO
BP GO:0016458 gene silencing IEP Predicted GO
BP GO:0016571 histone methylation IEP Predicted GO
BP GO:0018022 peptidyl-lysine methylation IEP Predicted GO
BP GO:0019637 organophosphate metabolic process IEP Predicted GO
MF GO:0019829 cation-transporting ATPase activity IEP Predicted GO
MF GO:0022853 active ion transmembrane transporter activity IEP Predicted GO
BP GO:0031047 gene silencing by RNA IEP Predicted GO
CC GO:0031461 cullin-RING ubiquitin ligase complex IEP Predicted GO
BP GO:0032957 inositol trisphosphate metabolic process IEP Predicted GO
CC GO:0033178 proton-transporting two-sector ATPase complex, catalytic domain IEP Predicted GO
BP GO:0034968 histone lysine methylation IEP Predicted GO
MF GO:0042625 ATPase coupled ion transmembrane transporter activity IEP Predicted GO
CC GO:0043227 membrane-bounded organelle IEP Predicted GO
CC GO:0043231 intracellular membrane-bounded organelle IEP Predicted GO
BP GO:0043647 inositol phosphate metabolic process IEP Predicted GO
CC GO:0044464 cell part IEP Predicted GO
MF GO:0044769 ATPase activity, coupled to transmembrane movement of ions, rotational mechanism IEP Predicted GO
CC GO:0045261 proton-transporting ATP synthase complex, catalytic core F(1) IEP Predicted GO
MF GO:0046933 proton-transporting ATP synthase activity, rotational mechanism IEP Predicted GO
MF GO:0047325 inositol tetrakisphosphate 1-kinase activity IEP Predicted GO
MF GO:0051765 inositol tetrakisphosphate kinase activity IEP Predicted GO
MF GO:0051766 inositol trisphosphate kinase activity IEP Predicted GO
MF GO:0052725 inositol-1,3,4-trisphosphate 6-kinase activity IEP Predicted GO
MF GO:0052726 inositol-1,3,4-trisphosphate 5-kinase activity IEP Predicted GO
MF GO:0070001 aspartic-type peptidase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR003958 CBFA_NFYB_domain 26 90
No external refs found!