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  5. Solyc12g006180

Solyc12g006180


Description : RNA-binding protein, putative (AHRD V3.3 *** Q1ENZ5_MUSAC)


Gene families : OG_42_0000197 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000197_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood Solanum release: Solyc12g006180
Cluster HCCA clusters: Cluster_107

Target Alias Description ECC score Gene Family Method Actions
At4g26650 No alias AT4g26650/T15N24_100 [Source:UniProtKB/TrEMBL;Acc:Q8W569] 0.03 Orthogroups_2024-Update
Brara.I01999.1 No alias Unknown function 0.02 Orthogroups_2024-Update
GRMZM2G162954 No alias RNA-binding (RRM/RBD/RNP motifs) family protein 0.03 Orthogroups_2024-Update
HORVU0Hr1G008280.1 No alias Unknown function 0.03 Orthogroups_2024-Update
PSME_00002580-RA No alias (at3g07810 : 236.0) RNA-binding (RRM/RBD/RNP motifs)... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0004852 uroporphyrinogen-III synthase activity IEP Predicted GO
CC GO:0005875 microtubule associated complex IEP Predicted GO
MF GO:0016836 hydro-lyase activity IEP Predicted GO
CC GO:0030286 dynein complex IEP Predicted GO
BP GO:0033013 tetrapyrrole metabolic process IEP Predicted GO
BP GO:0033014 tetrapyrrole biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR000504 RRM_dom 110 167
IPR000504 RRM_dom 8 69
No external refs found!