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  5. Pp1s46_42V6

Pp1s46_42V6


Description : ribulose- -bisphosphate carboxylase oxygenase small subunit


Gene families : OG_42_0000599 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000599_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Physcomitrella release: Pp1s46_42V6
Cluster HCCA clusters: Cluster_15

Target Alias Description ECC score Gene Family Method Actions
A4A49_09526 No alias ribulose bisphosphate carboxylase small chain, chloroplastic 0.04 Orthogroups_2024-Update
Bradi3g26391 No alias ribulose bisphosphate carboxylase small chain 1A 0.03 Orthogroups_2024-Update
Bradi4g08800 No alias ribulose bisphosphate carboxylase small chain 1A 0.03 Orthogroups_2024-Update
Glyma.13G046200 No alias Ribulose bisphosphate carboxylase (small chain) family protein 0.06 Orthogroups_2024-Update
HORVU1Hr1G035720.5 No alias small subunit of ribulose-1,5-bisphosphat... 0.04 Orthogroups_2024-Update
HORVU2Hr1G010630.1 No alias small subunit of ribulose-1,5-bisphosphat... 0.06 Orthogroups_2024-Update
HORVU2Hr1G010670.1 No alias small subunit of ribulose-1,5-bisphosphat... 0.06 Orthogroups_2024-Update
HORVU2Hr1G010690.15 No alias small subunit of ribulose-1,5-bisphosphat... 0.06 Orthogroups_2024-Update
Kfl00093_0320 kfl00093_0320_v1.1 (o65349|rbs_capan : 181.0) Ribulose bisphosphate... 0.02 Orthogroups_2024-Update
MA_47626g0010 No alias (p10053|rbs_pinth : 299.0) Ribulose bisphosphate... 0.03 Orthogroups_2024-Update
Mp4g06010.1 No alias small subunit of ribulose-1,5-bisphosphat... 0.02 Orthogroups_2024-Update
Mp4g06030.1 No alias small subunit of ribulose-1,5-bisphosphat... 0.03 Orthogroups_2024-Update
Mp4g06050.1 No alias small subunit of ribulose-1,5-bisphosphat... 0.04 Orthogroups_2024-Update
Mp4g10850.1 No alias small subunit of ribulose-1,5-bisphosphat... 0.02 Orthogroups_2024-Update
Mp4g15070.1 No alias small subunit of ribulose-1,5-bisphosphat... 0.05 Orthogroups_2024-Update
Mp4g15080.1 No alias small subunit of ribulose-1,5-bisphosphat... 0.04 Orthogroups_2024-Update
Potri.004G100000 No alias ribulose bisphosphate carboxylase small chain 1A 0.05 Orthogroups_2024-Update
Pp1s352_14V6 No alias ribulose- -bisphosphate carboxylase oxygenase small subunit 0.02 Orthogroups_2024-Update
Seita.3G269500.1 No alias small subunit of ribulose-1,5-bisphosphat... 0.05 Orthogroups_2024-Update
Seita.3G269600.1 No alias small subunit of ribulose-1,5-bisphosphat... 0.08 Orthogroups_2024-Update
Seita.3G312000.1 No alias small subunit of ribulose-1,5-bisphosphat... 0.08 Orthogroups_2024-Update
Seita.3G312200.1 No alias small subunit of ribulose-1,5-bisphosphat... 0.02 Orthogroups_2024-Update
Seita.3G312400.1 No alias small subunit of ribulose-1,5-bisphosphat... 0.08 Orthogroups_2024-Update
Sobic.005G042000.1 No alias small subunit of ribulose-1,5-bisphosphat... 0.08 Orthogroups_2024-Update
Solyc02g063150 No alias RuBP carboxylase small subunit 0.05 Orthogroups_2024-Update
Solyc02g085950 No alias cell wall protein X77373 0.05 Orthogroups_2024-Update
Solyc03g034220 No alias Tomato RuBP carboxylase small subunit 0.05 Orthogroups_2024-Update
Sopen02g030630 No alias Ribulose bisphosphate carboxylase, small chain 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000774 adenyl-nucleotide exchange factor activity IEP Predicted GO
BP GO:0001505 regulation of neurotransmitter levels IEP Predicted GO
MF GO:0003674 molecular_function IEP Predicted GO
MF GO:0004089 carbonate dehydratase activity IEP Predicted GO
MF GO:0004375 glycine dehydrogenase (decarboxylating) activity IEP Predicted GO
MF GO:0004497 monooxygenase activity IEP Predicted GO
MF GO:0004853 uroporphyrinogen decarboxylase activity IEP Predicted GO
MF GO:0005488 binding IEP Predicted GO
MF GO:0005507 copper ion binding IEP Predicted GO
CC GO:0005575 cellular_component IEP Predicted GO
BP GO:0006544 glycine metabolic process IEP Predicted GO
BP GO:0006546 glycine catabolic process IEP Predicted GO
BP GO:0006778 porphyrin-containing compound metabolic process IEP Predicted GO
BP GO:0006779 porphyrin-containing compound biosynthetic process IEP Predicted GO
BP GO:0008152 metabolic process IEP Predicted GO
MF GO:0008289 lipid binding IEP Predicted GO
BP GO:0009063 cellular amino acid catabolic process IEP Predicted GO
BP GO:0009069 serine family amino acid metabolic process IEP Predicted GO
BP GO:0009071 serine family amino acid catabolic process IEP Predicted GO
MF GO:0009496 plastoquinol--plastocyanin reductase activity IEP Predicted GO
CC GO:0009507 chloroplast IEP Predicted GO
CC GO:0009512 cytochrome b6f complex IEP Predicted GO
CC GO:0009521 photosystem IEP Predicted GO
CC GO:0009523 photosystem II IEP Predicted GO
CC GO:0009536 plastid IEP Predicted GO
CC GO:0009654 photosystem II oxygen evolving complex IEP Predicted GO
BP GO:0010109 regulation of photosynthesis IEP Predicted GO
BP GO:0010207 photosystem II assembly IEP Predicted GO
MF GO:0010242 oxygen evolving activity IEP Predicted GO
MF GO:0010277 chlorophyllide a oxygenase [overall] activity IEP Predicted GO
BP GO:0015979 photosynthesis IEP Predicted GO
BP GO:0015985 energy coupled proton transport, down electrochemical gradient IEP Predicted GO
BP GO:0015986 ATP synthesis coupled proton transport IEP Predicted GO
BP GO:0016054 organic acid catabolic process IEP Predicted GO
MF GO:0016491 oxidoreductase activity IEP Predicted GO
MF GO:0016638 oxidoreductase activity, acting on the CH-NH2 group of donors IEP Predicted GO
MF GO:0016642 oxidoreductase activity, acting on the CH-NH2 group of donors, disulfide as acceptor IEP Predicted GO
MF GO:0016679 oxidoreductase activity, acting on diphenols and related substances as donors IEP Predicted GO
MF GO:0016703 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases) IEP Predicted GO
MF GO:0016829 lyase activity IEP Predicted GO
MF GO:0016836 hydro-lyase activity IEP Predicted GO
MF GO:0016854 racemase and epimerase activity IEP Predicted GO
MF GO:0016857 racemase and epimerase activity, acting on carbohydrates and derivatives IEP Predicted GO
BP GO:0017144 drug metabolic process IEP Predicted GO
MF GO:0019829 cation-transporting ATPase activity IEP Predicted GO
BP GO:0022607 cellular component assembly IEP Predicted GO
MF GO:0022853 active ion transmembrane transporter activity IEP Predicted GO
CC GO:0032991 protein-containing complex IEP Predicted GO
BP GO:0033013 tetrapyrrole metabolic process IEP Predicted GO
BP GO:0033014 tetrapyrrole biosynthetic process IEP Predicted GO
CC GO:0033178 proton-transporting two-sector ATPase complex, catalytic domain IEP Predicted GO
CC GO:0034357 photosynthetic membrane IEP Predicted GO
BP GO:0034622 cellular protein-containing complex assembly IEP Predicted GO
BP GO:0042133 neurotransmitter metabolic process IEP Predicted GO
BP GO:0042135 neurotransmitter catabolic process IEP Predicted GO
BP GO:0042548 regulation of photosynthesis, light reaction IEP Predicted GO
BP GO:0042549 photosystem II stabilization IEP Predicted GO
MF GO:0042625 ATPase coupled ion transmembrane transporter activity IEP Predicted GO
CC GO:0042651 thylakoid membrane IEP Predicted GO
BP GO:0042737 drug catabolic process IEP Predicted GO
MF GO:0042802 identical protein binding IEP Predicted GO
MF GO:0042803 protein homodimerization activity IEP Predicted GO
BP GO:0043467 regulation of generation of precursor metabolites and energy IEP Predicted GO
BP GO:0043933 protein-containing complex subunit organization IEP Predicted GO
BP GO:0044282 small molecule catabolic process IEP Predicted GO
CC GO:0044424 intracellular part IEP Predicted GO
CC GO:0044425 membrane part IEP Predicted GO
CC GO:0044436 thylakoid part IEP Predicted GO
CC GO:0044464 cell part IEP Predicted GO
MF GO:0044769 ATPase activity, coupled to transmembrane movement of ions, rotational mechanism IEP Predicted GO
CC GO:0045261 proton-transporting ATP synthase complex, catalytic core F(1) IEP Predicted GO
BP GO:0046395 carboxylic acid catabolic process IEP Predicted GO
MF GO:0046933 proton-transporting ATP synthase activity, rotational mechanism IEP Predicted GO
MF GO:0046983 protein dimerization activity IEP Predicted GO
MF GO:0048037 cofactor binding IEP Predicted GO
MF GO:0051087 chaperone binding IEP Predicted GO
MF GO:0051536 iron-sulfur cluster binding IEP Predicted GO
MF GO:0051537 2 iron, 2 sulfur cluster binding IEP Predicted GO
MF GO:0051540 metal cluster binding IEP Predicted GO
MF GO:0052880 oxidoreductase activity, acting on diphenols and related substances as donors, with copper protein as acceptor IEP Predicted GO
BP GO:0055114 oxidation-reduction process IEP Predicted GO
MF GO:0060590 ATPase regulator activity IEP Predicted GO
BP GO:0065003 protein-containing complex assembly IEP Predicted GO
CC GO:0070069 cytochrome complex IEP Predicted GO
CC GO:0098796 membrane protein complex IEP Predicted GO
BP GO:1901606 alpha-amino acid catabolic process IEP Predicted GO
CC GO:1902494 catalytic complex IEP Predicted GO
CC GO:1990204 oxidoreductase complex IEP Predicted GO
InterPro domains Description Start Stop
IPR000894 RuBisCO_sc_dom 73 181
No external refs found!