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  5. Solyc12g006240

Solyc12g006240


Description : CONSTANS-like zinc finger protein (AHRD V3.3 *** A0A023GS52_SOYBN)


Gene families : OG_42_0001800 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001800_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc12g006240
Cluster HCCA clusters: Cluster_105

Target Alias Description ECC score Gene Family Method Actions
At5g48250 No alias Zinc finger protein CONSTANS-LIKE 10... 0.03 Orthogroups_2024-Update
Bradi1g43220 No alias CONSTANS-like 9 0.02 Orthogroups_2024-Update
Brara.F03023.1 No alias BBX class-II transcription factor 0.03 Orthogroups_2024-Update
Glyma.02G223700 No alias B-box type zinc finger protein with CCT domain 0.05 Orthogroups_2024-Update
Glyma.14G190400 No alias B-box type zinc finger protein with CCT domain 0.03 Orthogroups_2024-Update
Glyma.20G060400 No alias CONSTANS-like 9 0.04 Orthogroups_2024-Update
Kfl00279_0070 kfl00279_0070_v1.1 (at1g28050 : 119.0) B-box type zinc finger protein with... 0.02 Orthogroups_2024-Update
MA_90307g0010 No alias (at5g48250 : 150.0) B-box type zinc finger protein with... 0.04 Orthogroups_2024-Update
Potri.014G170600 No alias CONSTANS-like 9 0.04 Orthogroups_2024-Update
Sopen12g002190 No alias CCT motif 0.09 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0000213 tRNA-intron endonuclease activity IEP Predicted GO
BP GO:0000394 RNA splicing, via endonucleolytic cleavage and ligation IEP Predicted GO
MF GO:0003729 mRNA binding IEP Predicted GO
MF GO:0004180 carboxypeptidase activity IEP Predicted GO
MF GO:0004185 serine-type carboxypeptidase activity IEP Predicted GO
MF GO:0004549 tRNA-specific ribonuclease activity IEP Predicted GO
MF GO:0004888 transmembrane signaling receptor activity IEP Predicted GO
MF GO:0004970 ionotropic glutamate receptor activity IEP Predicted GO
MF GO:0005230 extracellular ligand-gated ion channel activity IEP Predicted GO
CC GO:0005849 mRNA cleavage factor complex IEP Predicted GO
BP GO:0006378 mRNA polyadenylation IEP Predicted GO
BP GO:0006388 tRNA splicing, via endonucleolytic cleavage and ligation IEP Predicted GO
BP GO:0006396 RNA processing IEP Predicted GO
BP GO:0006778 porphyrin-containing compound metabolic process IEP Predicted GO
BP GO:0006787 porphyrin-containing compound catabolic process IEP Predicted GO
MF GO:0008066 glutamate receptor activity IEP Predicted GO
MF GO:0008238 exopeptidase activity IEP Predicted GO
MF GO:0008270 zinc ion binding IEP Predicted GO
MF GO:0008649 rRNA methyltransferase activity IEP Predicted GO
MF GO:0009916 alternative oxidase activity IEP Predicted GO
MF GO:0015276 ligand-gated ion channel activity IEP Predicted GO
BP GO:0015994 chlorophyll metabolic process IEP Predicted GO
BP GO:0015996 chlorophyll catabolic process IEP Predicted GO
MF GO:0016679 oxidoreductase activity, acting on diphenols and related substances as donors IEP Predicted GO
MF GO:0016682 oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor IEP Predicted GO
MF GO:0016854 racemase and epimerase activity IEP Predicted GO
MF GO:0016855 racemase and epimerase activity, acting on amino acids and derivatives IEP Predicted GO
MF GO:0016892 endoribonuclease activity, producing 3'-phosphomonoesters IEP Predicted GO
MF GO:0016894 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 3'-phosphomonoesters IEP Predicted GO
MF GO:0022824 transmitter-gated ion channel activity IEP Predicted GO
MF GO:0022834 ligand-gated channel activity IEP Predicted GO
MF GO:0022835 transmitter-gated channel activity IEP Predicted GO
MF GO:0030594 neurotransmitter receptor activity IEP Predicted GO
BP GO:0031123 RNA 3'-end processing IEP Predicted GO
BP GO:0031124 mRNA 3'-end processing IEP Predicted GO
BP GO:0033015 tetrapyrrole catabolic process IEP Predicted GO
BP GO:0034470 ncRNA processing IEP Predicted GO
BP GO:0034660 ncRNA metabolic process IEP Predicted GO
MF GO:0036361 racemase activity, acting on amino acids and derivatives IEP Predicted GO
MF GO:0038023 signaling receptor activity IEP Predicted GO
BP GO:0042440 pigment metabolic process IEP Predicted GO
MF GO:0043167 ion binding IEP Predicted GO
MF GO:0043169 cation binding IEP Predicted GO
BP GO:0043631 RNA polyadenylation IEP Predicted GO
BP GO:0046149 pigment catabolic process IEP Predicted GO
MF GO:0046872 metal ion binding IEP Predicted GO
MF GO:0046914 transition metal ion binding IEP Predicted GO
MF GO:0047746 chlorophyllase activity IEP Predicted GO
BP GO:0051187 cofactor catabolic process IEP Predicted GO
MF GO:0060089 molecular transducer activity IEP Predicted GO
MF GO:0070008 serine-type exopeptidase activity IEP Predicted GO
MF GO:0140102 catalytic activity, acting on a rRNA IEP Predicted GO
InterPro domains Description Start Stop
IPR010402 CCT_domain 352 394
No external refs found!