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  5. Solyc12g006280

Solyc12g006280


Description : Homeodomain-like superfamily protein (AHRD V3.3 *-* AT2G40260.1)


Gene families : OG_42_0000021 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000021_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc12g006280
Cluster HCCA clusters: Cluster_42

Target Alias Description ECC score Gene Family Method Actions
A4A49_11176 No alias putative myb family transcription factor 0.05 Orthogroups_2024-Update
AC234155.1_FG002 No alias Homeodomain-like superfamily protein 0.04 Orthogroups_2024-Update
At2g20400 No alias myb-like HTH transcriptional regulator family protein... 0.04 Orthogroups_2024-Update
At2g42660 No alias At2g45350/F14N22.7 [Source:UniProtKB/TrEMBL;Acc:Q9SJJ0] 0.04 Orthogroups_2024-Update
At5g42630 No alias Probable transcription factor KAN4... 0.04 Orthogroups_2024-Update
Bradi3g36710 No alias Homeodomain-like superfamily protein 0.02 Orthogroups_2024-Update
GRMZM2G052544 No alias Homeodomain-like superfamily protein 0.02 Orthogroups_2024-Update
GRMZM2G370425 No alias Homeodomain-like superfamily protein 0.04 Orthogroups_2024-Update
Glyma.03G003500 No alias myb-like HTH transcriptional regulator family protein 0.03 Orthogroups_2024-Update
Glyma.09G004500 No alias Homeodomain-like superfamily protein 0.03 Orthogroups_2024-Update
Glyma.18G043000 No alias Homeodomain-like superfamily protein 0.03 Orthogroups_2024-Update
HORVU2Hr1G045770.1 No alias Unknown function 0.03 Orthogroups_2024-Update
HORVU2Hr1G102040.15 No alias GARP subgroup PHL transcription factor 0.03 Orthogroups_2024-Update
HORVU4Hr1G051080.3 No alias GARP subgroup PHL transcription factor & transcription... 0.04 Orthogroups_2024-Update
HORVU7Hr1G107500.1 No alias Unknown function 0.02 Orthogroups_2024-Update
LOC_Os02g07770 No alias Myb transcription factor, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os04g51130 No alias expressed protein 0.03 Orthogroups_2024-Update
Mp3g04970.1 No alias G2-like GARP transcription factor 0.02 Orthogroups_2024-Update
PSME_00022449-RA No alias (at2g40260 : 137.0) Homeodomain-like superfamily... 0.08 Orthogroups_2024-Update
PSME_00043566-RA No alias (at3g04030 : 229.0) Homeodomain-like superfamily... 0.02 Orthogroups_2024-Update
PSME_00043647-RA No alias (at3g24120 : 209.0) Homeodomain-like superfamily... 0.04 Orthogroups_2024-Update
Potri.003G096300 No alias Homeodomain-like superfamily protein 0.03 Orthogroups_2024-Update
Potri.005G205900 No alias Homeodomain-like superfamily protein 0.03 Orthogroups_2024-Update
Potri.006G101000 No alias myb-like HTH transcriptional regulator family protein 0.03 Orthogroups_2024-Update
Potri.008G087600 No alias Homeodomain-like superfamily protein 0.02 Orthogroups_2024-Update
Pp1s73_118V6 No alias No description available 0.03 Orthogroups_2024-Update
Seita.7G223500.1 No alias GARP subgroup PHL transcription factor 0.05 Orthogroups_2024-Update
Seita.8G019800.1 No alias transcription factor *(CLAUSA) 0.03 Orthogroups_2024-Update
Sobic.009G178000.1 No alias GARP subgroup PHL transcription factor 0.03 Orthogroups_2024-Update
Sobic.010G224200.1 No alias transcription factor *(CLAUSA) 0.03 Orthogroups_2024-Update
Sopen04g007370 No alias Myb-like DNA-binding domain 0.02 Orthogroups_2024-Update
Sopen04g033180 No alias Myb-like DNA-binding domain 0.04 Orthogroups_2024-Update
Sopen05g029510 No alias Myb-like DNA-binding domain 0.06 Orthogroups_2024-Update
Sopen07g023530 No alias Myb-like DNA-binding domain 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP Predicted GO
MF GO:0003824 catalytic activity IEP Predicted GO
MF GO:0003860 3-hydroxyisobutyryl-CoA hydrolase activity IEP Predicted GO
MF GO:0005506 iron ion binding IEP Predicted GO
MF GO:0005544 calcium-dependent phospholipid binding IEP Predicted GO
BP GO:0006629 lipid metabolic process IEP Predicted GO
BP GO:0006631 fatty acid metabolic process IEP Predicted GO
BP GO:0006694 steroid biosynthetic process IEP Predicted GO
BP GO:0006952 defense response IEP Predicted GO
BP GO:0008152 metabolic process IEP Predicted GO
MF GO:0008168 methyltransferase activity IEP Predicted GO
BP GO:0008202 steroid metabolic process IEP Predicted GO
BP GO:0008610 lipid biosynthetic process IEP Predicted GO
BP GO:0009607 response to biotic stimulus IEP Predicted GO
MF GO:0010333 terpene synthase activity IEP Predicted GO
MF GO:0016289 CoA hydrolase activity IEP Predicted GO
MF GO:0016491 oxidoreductase activity IEP Predicted GO
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Predicted GO
MF GO:0016717 oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water IEP Predicted GO
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Predicted GO
MF GO:0016790 thiolester hydrolase activity IEP Predicted GO
MF GO:0016829 lyase activity IEP Predicted GO
MF GO:0016835 carbon-oxygen lyase activity IEP Predicted GO
MF GO:0016838 carbon-oxygen lyase activity, acting on phosphates IEP Predicted GO
MF GO:0020037 heme binding IEP Predicted GO
BP GO:0032787 monocarboxylic acid metabolic process IEP Predicted GO
MF GO:0043167 ion binding IEP Predicted GO
MF GO:0043169 cation binding IEP Predicted GO
BP GO:0044255 cellular lipid metabolic process IEP Predicted GO
MF GO:0045300 acyl-[acyl-carrier-protein] desaturase activity IEP Predicted GO
MF GO:0046872 metal ion binding IEP Predicted GO
MF GO:0046906 tetrapyrrole binding IEP Predicted GO
MF GO:0046914 transition metal ion binding IEP Predicted GO
MF GO:0048037 cofactor binding IEP Predicted GO
BP GO:0055114 oxidation-reduction process IEP Predicted GO
InterPro domains Description Start Stop
IPR001005 SANT/Myb 31 82
No external refs found!