Pp1s47_241V6

Description : mitochondrial ribosomal protein s6

Gene families : OG_42_0005211 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0005211_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Physcomitrella release: Pp1s47_241V6
Cluster	HCCA clusters: Cluster_197

Target	Alias	Description	ECC score	Gene Family Method	Actions
HORVU0Hr1G006350.2	No alias	component *(uS6m) of small mitoribosomal-subunit proteome	0.05	Orthogroups_2024-Update
LOC_Os01g12090	No alias	ribosomal protein S6 family protein, putative, expressed	0.02	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003723	RNA binding	None	Extended
MF	GO:0003735	structural constituent of ribosome	IEA	InterProScan predictions
MF	GO:0005198	structural molecule activity	None	Extended
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005840	ribosome	IEA	InterProScan predictions
BP	GO:0006412	translation	IEA	InterProScan predictions
BP	GO:0006518	peptide metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
MF	GO:0019843	rRNA binding	IEA	InterProScan predictions
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
BP	GO:0043043	peptide biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043228	non-membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043232	intracellular non-membrane-bounded organelle	None	Extended
BP	GO:0043603	cellular amide metabolic process	None	Extended
BP	GO:0043604	amide biosynthetic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044267	cellular protein metabolic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044444	cytoplasmic part	None	Extended
CC	GO:0044464	cell part	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended
CC	GO:1990904	ribonucleoprotein complex	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0001906	cell killing	IEP	Predicted GO
MF	GO:0015267	channel activity	IEP	Predicted GO
BP	GO:0019835	cytolysis	IEP	Predicted GO
MF	GO:0022803	passive transmembrane transporter activity	IEP	Predicted GO
BP	GO:0031640	killing of cells of other organism	IEP	Predicted GO
BP	GO:0035821	modification of morphology or physiology of other organism	IEP	Predicted GO
BP	GO:0044179	hemolysis in other organism	IEP	Predicted GO
BP	GO:0044364	disruption of cells of other organism	IEP	Predicted GO
BP	GO:0044419	interspecies interaction between organisms	IEP	Predicted GO
BP	GO:0044764	multi-organism cellular process	IEP	Predicted GO
CC	GO:0046930	pore complex	IEP	Predicted GO
BP	GO:0046931	pore complex assembly	IEP	Predicted GO
BP	GO:0051704	multi-organism process	IEP	Predicted GO
BP	GO:0051715	cytolysis in other organism	IEP	Predicted GO
BP	GO:0051801	cytolysis in other organism involved in symbiotic interaction	IEP	Predicted GO
BP	GO:0051817	modification of morphology or physiology of other organism involved in symbiotic interaction	IEP	Predicted GO
BP	GO:0051818	disruption of cells of other organism involved in symbiotic interaction	IEP	Predicted GO
BP	GO:0051883	killing of cells in other organism involved in symbiotic interaction	IEP	Predicted GO
BP	GO:0052331	hemolysis in other organism involved in symbiotic interaction	IEP	Predicted GO
BP	GO:0065003	protein-containing complex assembly	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR000529	Ribosomal_S6	4	95

External Links

No external refs found!

Pp1s47_241V6

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation