1. Home
  2. Species
  3. Physcomitrella patens
  4. Sequence
  5. Pp1s488_10V6

Pp1s488_10V6


Description : probable bacterial cryptochrome


Gene families : OG_42_0001991 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001991_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Physcomitrella release: Pp1s488_10V6
Cluster HCCA clusters: Cluster_15

Target Alias Description ECC score Gene Family Method Actions
106065 No alias cryptochrome 3 0.03 Orthogroups_2024-Update
Bradi1g31670 No alias cryptochrome 3 0.03 Orthogroups_2024-Update
HORVU7Hr1G109800.14 No alias cryptochrome-DASH photoreceptor *(CRYD) 0.02 Orthogroups_2024-Update
Kfl00005_0340 kfl00005_0340_v1.1 (at5g24850 : 557.0) Binds flavin adenine dinucleotide... 0.02 Orthogroups_2024-Update
Kfl00383_0070 kfl00383_0070_v1.1 (at2g47590 : 367.0) photolyase/blue light photoreceptor... 0.01 Orthogroups_2024-Update
Mp1g25600.1 No alias Cryptochrome DASH, chloroplastic/mitochondrial OS=Oryza... 0.08 Orthogroups_2024-Update
Potri.006G277500 No alias cryptochrome 3 0.03 Orthogroups_2024-Update
Seita.4G187800.1 No alias cryptochrome-DASH photoreceptor *(CRYD) 0.02 Orthogroups_2024-Update
evm.model.tig00020965.70 No alias (q651u1|cryd_orysa : 216.0) Cryptochrome DASH,... 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004366 glycerol-3-phosphate O-acyltransferase activity IEP Predicted GO
MF GO:0004512 inositol-3-phosphate synthase activity IEP Predicted GO
MF GO:0005506 iron ion binding IEP Predicted GO
MF GO:0005524 ATP binding IEP Predicted GO
BP GO:0006020 inositol metabolic process IEP Predicted GO
BP GO:0006021 inositol biosynthetic process IEP Predicted GO
BP GO:0006066 alcohol metabolic process IEP Predicted GO
BP GO:0006464 cellular protein modification process IEP Predicted GO
BP GO:0006793 phosphorus metabolic process IEP Predicted GO
BP GO:0006796 phosphate-containing compound metabolic process IEP Predicted GO
MF GO:0008144 drug binding IEP Predicted GO
MF GO:0008374 O-acyltransferase activity IEP Predicted GO
MF GO:0008987 quinolinate synthetase A activity IEP Predicted GO
BP GO:0009435 NAD biosynthetic process IEP Predicted GO
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Predicted GO
MF GO:0016872 intramolecular lyase activity IEP Predicted GO
MF GO:0017076 purine nucleotide binding IEP Predicted GO
BP GO:0019674 NAD metabolic process IEP Predicted GO
BP GO:0019751 polyol metabolic process IEP Predicted GO
MF GO:0030554 adenyl nucleotide binding IEP Predicted GO
MF GO:0032553 ribonucleotide binding IEP Predicted GO
MF GO:0032555 purine ribonucleotide binding IEP Predicted GO
MF GO:0032559 adenyl ribonucleotide binding IEP Predicted GO
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Predicted GO
MF GO:0036094 small molecule binding IEP Predicted GO
BP GO:0036211 protein modification process IEP Predicted GO
MF GO:0043167 ion binding IEP Predicted GO
MF GO:0043168 anion binding IEP Predicted GO
BP GO:0046165 alcohol biosynthetic process IEP Predicted GO
BP GO:0046173 polyol biosynthetic process IEP Predicted GO
MF GO:0048037 cofactor binding IEP Predicted GO
MF GO:0051539 4 iron, 4 sulfur cluster binding IEP Predicted GO
BP GO:0090407 organophosphate biosynthetic process IEP Predicted GO
MF GO:0097367 carbohydrate derivative binding IEP Predicted GO
BP GO:1901615 organic hydroxy compound metabolic process IEP Predicted GO
BP GO:1901617 organic hydroxy compound biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR005101 Cryptochr/Photolyase_FAD-bd 359 515
IPR006050 DNA_photolyase_N 66 237
No external refs found!