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  5. Pp1s49_140V6

Pp1s49_140V6


Description : KANADI 2


Gene families : OG_42_0000021 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000021_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Physcomitrella release: Pp1s49_140V6
Cluster HCCA clusters: Cluster_23

Target Alias Description ECC score Gene Family Method Actions
AC234155.1_FG002 No alias Homeodomain-like superfamily protein 0.02 Orthogroups_2024-Update
Bradi3g36260 No alias Homeodomain-like superfamily protein 0.02 Orthogroups_2024-Update
Brara.I00432.1 No alias GARP subgroup PHL transcription factor & transcription... 0.02 Orthogroups_2024-Update
Brara.I02613.1 No alias KANADI-type transcription factor 0.02 Orthogroups_2024-Update
Cre12.g495100 No alias myb-like HTH transcriptional regulator family protein 0.02 Orthogroups_2024-Update
Glyma.01G014800 No alias Homeodomain-like superfamily protein 0.03 Orthogroups_2024-Update
Glyma.02G178100 No alias myb-like HTH transcriptional regulator family protein 0.02 Orthogroups_2024-Update
Glyma.07G106800 No alias Homeodomain-like superfamily protein 0.03 Orthogroups_2024-Update
Glyma.09G171100 No alias Homeodomain-like superfamily protein 0.02 Orthogroups_2024-Update
Glyma.09G207300 No alias Homeodomain-like superfamily protein 0.03 Orthogroups_2024-Update
HORVU1Hr1G068930.39 No alias GARP subgroup PHL transcription factor 0.03 Orthogroups_2024-Update
LOC_Os07g25710 No alias myb-like DNA-binding domain containing protein, expressed 0.03 Orthogroups_2024-Update
MA_1432g0010 No alias (at3g13040 : 86.3) myb-like HTH transcriptional... 0.03 Orthogroups_2024-Update
Potri.003G100100 No alias Homeodomain-like superfamily protein 0.03 Orthogroups_2024-Update
Pp1s114_151V6 No alias kan transcription factor 0.02 Orthogroups_2024-Update
Pp1s13_270V6 No alias MUJ8.2; myb family transcription factor [Arabidopsis thaliana] 0.02 Orthogroups_2024-Update
Pp1s143_30V6 No alias transfactor-like protein 0.02 Orthogroups_2024-Update
Pp1s201_75V6 No alias at3g24120 muj8_3 0.02 Orthogroups_2024-Update
Seita.6G158900.1 No alias GARP subgroup PHL transcription factor 0.03 Orthogroups_2024-Update
Solyc05g055940 No alias Myb-like transcription factor family protein (AHRD V3.3... 0.03 Orthogroups_2024-Update
Sopen05g034340 No alias MYB-CC type transfactor, LHEQLE motif 0.02 Orthogroups_2024-Update
Sopen08g024980 No alias Myb-like DNA-binding domain 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005096 GTPase activator activity IEP Predicted GO
MF GO:0005509 calcium ion binding IEP Predicted GO
BP GO:0005991 trehalose metabolic process IEP Predicted GO
BP GO:0005992 trehalose biosynthetic process IEP Predicted GO
MF GO:0008047 enzyme activator activity IEP Predicted GO
BP GO:0009312 oligosaccharide biosynthetic process IEP Predicted GO
CC GO:0009521 photosystem IEP Predicted GO
CC GO:0009522 photosystem I IEP Predicted GO
CC GO:0009523 photosystem II IEP Predicted GO
CC GO:0009538 photosystem I reaction center IEP Predicted GO
CC GO:0009654 photosystem II oxygen evolving complex IEP Predicted GO
BP GO:0015979 photosynthesis IEP Predicted GO
BP GO:0016226 iron-sulfur cluster assembly IEP Predicted GO
CC GO:0019898 extrinsic component of membrane IEP Predicted GO
MF GO:0030695 GTPase regulator activity IEP Predicted GO
BP GO:0031163 metallo-sulfur cluster assembly IEP Predicted GO
MF GO:0043167 ion binding IEP Predicted GO
MF GO:0043169 cation binding IEP Predicted GO
BP GO:0044237 cellular metabolic process IEP Predicted GO
CC GO:0044425 membrane part IEP Predicted GO
CC GO:0044436 thylakoid part IEP Predicted GO
BP GO:0046351 disaccharide biosynthetic process IEP Predicted GO
MF GO:0046872 metal ion binding IEP Predicted GO
CC GO:0098796 membrane protein complex IEP Predicted GO
CC GO:1902494 catalytic complex IEP Predicted GO
CC GO:1990204 oxidoreductase complex IEP Predicted GO
InterPro domains Description Start Stop
IPR001005 SANT/Myb 328 379
No external refs found!