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  5. Pp1s49_196V6

Pp1s49_196V6


Description : TLP3A TIR1-like auxin receptor protein


Gene families : OG_42_0000339 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000339_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood Physcomitrella release: Pp1s49_196V6
Cluster HCCA clusters: Cluster_259

Target Alias Description ECC score Gene Family Method Actions
GRMZM2G137451 No alias auxin signaling F-box 2 0.03 Orthogroups_2024-Update
LOC_Os04g32460 No alias OsFBL16 - F-box domain and LRR containing protein, expressed 0.02 Orthogroups_2024-Update
MA_15842g0010 No alias (at3g62980 : 510.0) Encodes an auxin receptor that... 0.02 Orthogroups_2024-Update
PSME_00005246-RA No alias (at3g62980 : 633.0) Encodes an auxin receptor that... 0.02 Orthogroups_2024-Update
Seita.5G385200.1 No alias component *(COI) of jasmonic acid receptor complex 0.04 Orthogroups_2024-Update
Sopen02g023990 No alias Leucine Rich repeat 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000270 peptidoglycan metabolic process IEP Predicted GO
MF GO:0004097 catechol oxidase activity IEP Predicted GO
MF GO:0005534 galactose binding IEP Predicted GO
BP GO:0006022 aminoglycan metabolic process IEP Predicted GO
BP GO:0006888 ER to Golgi vesicle-mediated transport IEP Predicted GO
MF GO:0008289 lipid binding IEP Predicted GO
BP GO:0009254 peptidoglycan turnover IEP Predicted GO
BP GO:0016567 protein ubiquitination IEP Predicted GO
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP Predicted GO
MF GO:0016636 oxidoreductase activity, acting on the CH-CH group of donors, iron-sulfur protein as acceptor IEP Predicted GO
MF GO:0016679 oxidoreductase activity, acting on diphenols and related substances as donors IEP Predicted GO
MF GO:0016682 oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor IEP Predicted GO
CC GO:0019867 outer membrane IEP Predicted GO
CC GO:0030117 membrane coat IEP Predicted GO
CC GO:0030120 vesicle coat IEP Predicted GO
CC GO:0030127 COPII vesicle coat IEP Predicted GO
BP GO:0030203 glycosaminoglycan metabolic process IEP Predicted GO
MF GO:0030246 carbohydrate binding IEP Predicted GO
BP GO:0032446 protein modification by small protein conjugation IEP Predicted GO
CC GO:0044433 cytoplasmic vesicle part IEP Predicted GO
MF GO:0048029 monosaccharide binding IEP Predicted GO
BP GO:0048193 Golgi vesicle transport IEP Predicted GO
MF GO:0051743 red chlorophyll catabolite reductase activity IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!