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  5. Solyc12g006850

Solyc12g006850


Description : LELKT1GEN L.esculentum potassium channel


Gene families : OG_42_0000182 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000182_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc12g006850
Cluster HCCA clusters: Cluster_46

Target Alias Description ECC score Gene Family Method Actions
Glyma.13G217800 No alias potassium channel in Arabidopsis thaliana 1 0.02 Orthogroups_2024-Update
HORVU7Hr1G040990.4 No alias voltage-gated potassium cation channel *(AKT/SKOR/GORK) 0.03 Orthogroups_2024-Update
LOC_Os01g45990 No alias potassium channel AKT1, putative, expressed 0.02 Orthogroups_2024-Update
MA_10436994g0030 No alias (at2g26650 : 613.0) Encodes AKT1, a member of the Shaker... 0.02 Orthogroups_2024-Update
PSME_00047867-RA No alias (at3g02850 : 954.0) Encodes SKOR, a member of Shaker... 0.02 Orthogroups_2024-Update
Potri.004G083300 No alias STELAR K+ outward rectifier 0.03 Orthogroups_2024-Update
Seita.1G020100.1 No alias voltage-gated potassium cation channel *(AKT/SKOR/GORK) 0.03 Orthogroups_2024-Update
Seita.1G210600.1 No alias voltage-gated potassium cation channel *(AKT/SKOR/GORK) 0.02 Orthogroups_2024-Update
Sopen12g002820 No alias Ankyrin repeats (3 copies) 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005216 ion channel activity IEA InterProScan predictions
BP GO:0006811 ion transport IEA InterProScan predictions
CC GO:0016020 membrane IEA InterProScan predictions
BP GO:0055085 transmembrane transport IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0000045 autophagosome assembly IEP Predicted GO
BP GO:0000375 RNA splicing, via transesterification reactions IEP Predicted GO
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Predicted GO
BP GO:0000398 mRNA splicing, via spliceosome IEP Predicted GO
MF GO:0003924 GTPase activity IEP Predicted GO
MF GO:0004175 endopeptidase activity IEP Predicted GO
MF GO:0004252 serine-type endopeptidase activity IEP Predicted GO
MF GO:0004871 obsolete signal transducer activity IEP Predicted GO
MF GO:0005342 organic acid transmembrane transporter activity IEP Predicted GO
BP GO:0006396 RNA processing IEP Predicted GO
BP GO:0006397 mRNA processing IEP Predicted GO
BP GO:0006508 proteolysis IEP Predicted GO
BP GO:0006807 nitrogen compound metabolic process IEP Predicted GO
BP GO:0007033 vacuole organization IEP Predicted GO
BP GO:0007186 G protein-coupled receptor signaling pathway IEP Predicted GO
MF GO:0008233 peptidase activity IEP Predicted GO
MF GO:0008236 serine-type peptidase activity IEP Predicted GO
MF GO:0008276 protein methyltransferase activity IEP Predicted GO
BP GO:0008380 RNA splicing IEP Predicted GO
MF GO:0015171 amino acid transmembrane transporter activity IEP Predicted GO
BP GO:0016071 mRNA metabolic process IEP Predicted GO
MF GO:0016278 lysine N-methyltransferase activity IEP Predicted GO
MF GO:0016279 protein-lysine N-methyltransferase activity IEP Predicted GO
BP GO:0016571 histone methylation IEP Predicted GO
MF GO:0017171 serine hydrolase activity IEP Predicted GO
BP GO:0018022 peptidyl-lysine methylation IEP Predicted GO
MF GO:0018024 histone-lysine N-methyltransferase activity IEP Predicted GO
MF GO:0031683 G-protein beta/gamma-subunit complex binding IEP Predicted GO
BP GO:0034968 histone lysine methylation IEP Predicted GO
MF GO:0042054 histone methyltransferase activity IEP Predicted GO
BP GO:0043170 macromolecule metabolic process IEP Predicted GO
MF GO:0046943 carboxylic acid transmembrane transporter activity IEP Predicted GO
MF GO:0070011 peptidase activity, acting on L-amino acid peptides IEP Predicted GO
BP GO:0070925 organelle assembly IEP Predicted GO
MF GO:0140096 catalytic activity, acting on a protein IEP Predicted GO
BP GO:1905037 autophagosome organization IEP Predicted GO
InterPro domains Description Start Stop
IPR020683 Ankyrin_rpt-contain_dom 630 711
IPR020683 Ankyrin_rpt-contain_dom 533 621
IPR000595 cNMP-bd_dom 401 485
IPR021789 KHA_dom 807 869
IPR005821 Ion_trans_dom 64 308
No external refs found!