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  5. Solyc12g006900

Solyc12g006900


No description available


Gene families : OG_42_0000103 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000103_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc12g006900
Cluster HCCA clusters: Cluster_126

Target Alias Description ECC score Gene Family Method Actions
Brara.I05395.1 No alias Unknown function 0.03 Orthogroups_2024-Update
LOC_Os01g34530 No alias transposon protein, putative, unclassified, expressed 0.03 Orthogroups_2024-Update
LOC_Os06g28990 No alias transposon protein, putative, Mutator sub-class, expressed 0.04 Orthogroups_2024-Update
Solyc08g061040 No alias No description available 0.02 Orthogroups_2024-Update
Solyc10g018730 No alias No description available 0.04 Orthogroups_2024-Update
Solyc10g045700 No alias No description available 0.03 Orthogroups_2024-Update
Solyc12g040670 No alias No description available 0.04 Orthogroups_2024-Update
Sopen05g009360 No alias hypothetical protein 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000041 transition metal ion transport IEP Predicted GO
BP GO:0000375 RNA splicing, via transesterification reactions IEP Predicted GO
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Predicted GO
BP GO:0000398 mRNA splicing, via spliceosome IEP Predicted GO
MF GO:0004014 adenosylmethionine decarboxylase activity IEP Predicted GO
MF GO:0005375 copper ion transmembrane transporter activity IEP Predicted GO
CC GO:0005681 spliceosomal complex IEP Predicted GO
BP GO:0006576 cellular biogenic amine metabolic process IEP Predicted GO
BP GO:0006595 polyamine metabolic process IEP Predicted GO
BP GO:0006596 polyamine biosynthetic process IEP Predicted GO
BP GO:0006597 spermine biosynthetic process IEP Predicted GO
BP GO:0006825 copper ion transport IEP Predicted GO
BP GO:0008215 spermine metabolic process IEP Predicted GO
BP GO:0008216 spermidine metabolic process IEP Predicted GO
BP GO:0008295 spermidine biosynthetic process IEP Predicted GO
BP GO:0008380 RNA splicing IEP Predicted GO
BP GO:0009308 amine metabolic process IEP Predicted GO
BP GO:0009309 amine biosynthetic process IEP Predicted GO
CC GO:0016459 myosin complex IEP Predicted GO
BP GO:0035434 copper ion transmembrane transport IEP Predicted GO
BP GO:0042401 cellular biogenic amine biosynthetic process IEP Predicted GO
BP GO:0044106 cellular amine metabolic process IEP Predicted GO
MF GO:0046915 transition metal ion transmembrane transporter activity IEP Predicted GO
BP GO:0097164 ammonium ion metabolic process IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!