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  5. Pp1s4_331V6

Pp1s4_331V6


Description : proteasome subunit alpha type 1


Gene families : OG_42_0004453 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0004453_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Physcomitrella release: Pp1s4_331V6
Cluster HCCA clusters: Cluster_294

Target Alias Description ECC score Gene Family Method Actions
Brara.B02476.1 No alias alpha-type-6 component *(PAF) of 26S proteasome & EC_3.4... 0.03 Orthogroups_2024-Update
Mp4g13080.1 No alias component alpha type-6 of 26S proteasome 0.03 Orthogroups_2024-Update
Potri.005G229200 No alias proteasome alpha subunit F1 0.02 Orthogroups_2024-Update
Seita.1G096200.1 No alias alpha-type-6 component *(PAF) of 26S proteasome & EC_3.4... 0.03 Orthogroups_2024-Update
evm.model.tig00000217.21 No alias (at5g42790 : 172.0) encodes a protein with extensive... 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0004175 endopeptidase activity IEA InterProScan predictions
MF GO:0004298 threonine-type endopeptidase activity IEA InterProScan predictions
CC GO:0005839 proteasome core complex IEA InterProScan predictions
BP GO:0006511 ubiquitin-dependent protein catabolic process IEA InterProScan predictions
CC GO:0019773 proteasome core complex, alpha-subunit complex IEA InterProScan predictions
BP GO:0051603 proteolysis involved in cellular protein catabolic process IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0001522 pseudouridine synthesis IEP Predicted GO
MF GO:0003690 double-stranded DNA binding IEP Predicted GO
BP GO:0006820 anion transport IEP Predicted GO
BP GO:0006835 dicarboxylic acid transport IEP Predicted GO
BP GO:0009451 RNA modification IEP Predicted GO
MF GO:0009982 pseudouridine synthase activity IEP Predicted GO
BP GO:0015711 organic anion transport IEP Predicted GO
BP GO:0015740 C4-dicarboxylate transport IEP Predicted GO
BP GO:0015743 malate transport IEP Predicted GO
BP GO:0015849 organic acid transport IEP Predicted GO
MF GO:0016866 intramolecular transferase activity IEP Predicted GO
BP GO:0046942 carboxylic acid transport IEP Predicted GO
InterPro domains Description Start Stop
IPR000426 Proteasome_asu_N 6 28
IPR001353 Proteasome_sua/b 29 214
No external refs found!