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  5. Pp1s4_362V6

Pp1s4_362V6


Description : gtp-binding protein


Gene families : OG_42_0002079 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002079_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Physcomitrella release: Pp1s4_362V6
Cluster HCCA clusters: Cluster_27

Target Alias Description ECC score Gene Family Method Actions
145812 No alias elongation factor family protein 0.08 Orthogroups_2024-Update
Bradi3g10530 No alias elongation factor family protein 0.03 Orthogroups_2024-Update
Cre13.g606000 No alias elongation factor family protein 0.02 Orthogroups_2024-Update
Glyma.02G182800 No alias elongation factor family protein 0.06 Orthogroups_2024-Update
Glyma.10G103000 No alias elongation factor family protein 0.08 Orthogroups_2024-Update
Kfl00065_0260 kfl00065_0260_v1.1 (at5g13650 : 873.0) elongation factor family protein;... 0.05 Orthogroups_2024-Update
LOC_Os02g18450 No alias GTP-binding protein typA/bipA, putative, expressed 0.02 Orthogroups_2024-Update
MA_138810g0010 No alias (at5g13650 : 642.0) elongation factor family protein;... 0.03 Orthogroups_2024-Update
Mp2g02820.1 No alias Putative elongation factor TypA-like SVR3, chloroplastic... 0.04 Orthogroups_2024-Update
Seita.1G127200.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Seita.1G127300.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Sobic.004G128900.1 No alias Unknown function 0.05 Orthogroups_2024-Update
Sopen03g011790 No alias Elongation factor Tu GTP binding domain 0.03 Orthogroups_2024-Update
evm.model.tig00000194.55 No alias (at5g13650 : 656.0) elongation factor family protein;... 0.02 Orthogroups_2024-Update
evm.model.tig00020614.28 No alias (at2g31060 : 269.0) elongation factor family protein;... 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEA InterProScan predictions
MF GO:0005525 GTP binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0000272 polysaccharide catabolic process IEP Predicted GO
MF GO:0004779 sulfate adenylyltransferase activity IEP Predicted GO
MF GO:0004781 sulfate adenylyltransferase (ATP) activity IEP Predicted GO
BP GO:0006298 mismatch repair IEP Predicted GO
BP GO:0006629 lipid metabolic process IEP Predicted GO
BP GO:0006720 isoprenoid metabolic process IEP Predicted GO
BP GO:0006771 riboflavin metabolic process IEP Predicted GO
BP GO:0008152 metabolic process IEP Predicted GO
BP GO:0008299 isoprenoid biosynthetic process IEP Predicted GO
BP GO:0008610 lipid biosynthetic process IEP Predicted GO
MF GO:0008686 3,4-dihydroxy-2-butanone-4-phosphate synthase activity IEP Predicted GO
MF GO:0008987 quinolinate synthetase A activity IEP Predicted GO
BP GO:0009231 riboflavin biosynthetic process IEP Predicted GO
BP GO:0009435 NAD biosynthetic process IEP Predicted GO
MF GO:0010181 FMN binding IEP Predicted GO
MF GO:0016160 amylase activity IEP Predicted GO
MF GO:0016161 beta-amylase activity IEP Predicted GO
MF GO:0016491 oxidoreductase activity IEP Predicted GO
BP GO:0019674 NAD metabolic process IEP Predicted GO
MF GO:0030983 mismatched DNA binding IEP Predicted GO
BP GO:0042726 flavin-containing compound metabolic process IEP Predicted GO
BP GO:0042727 flavin-containing compound biosynthetic process IEP Predicted GO
MF GO:0046914 transition metal ion binding IEP Predicted GO
MF GO:0048037 cofactor binding IEP Predicted GO
MF GO:0050662 coenzyme binding IEP Predicted GO
MF GO:0051539 4 iron, 4 sulfur cluster binding IEP Predicted GO
BP GO:0055114 oxidation-reduction process IEP Predicted GO
MF GO:0070566 adenylyltransferase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR000640 EFG_V-like 481 566
IPR004161 EFTu-like_2 304 374
IPR000795 TF_GTP-bd_dom 89 280
No external refs found!