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  5. Pp1s4_427V6

Pp1s4_427V6


Description : F2G19.22; expressed protein [Arabidopsis thaliana]


Gene families : OG_42_0000224 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000224_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Physcomitrella release: Pp1s4_427V6
Cluster HCCA clusters: Cluster_49

Target Alias Description ECC score Gene Family Method Actions
A4A49_12461 No alias e3 ubiquitin-protein ligase boi 0.04 Orthogroups_2024-Update
A4A49_29803 No alias putative boi-related e3 ubiquitin-protein ligase 3 0.03 Orthogroups_2024-Update
Bradi1g67280 No alias S-ribonuclease binding protein 1 0.02 Orthogroups_2024-Update
Bradi3g44570 No alias SBP (S-ribonuclease binding protein) family protein 0.04 Orthogroups_2024-Update
Brara.K00315.1 No alias Unknown function 0.03 Orthogroups_2024-Update
HORVU4Hr1G003180.3 No alias E3 ubiquitin ligase *(BRG) 0.03 Orthogroups_2024-Update
LOC_Os03g46570 No alias protein binding protein, putative, expressed 0.01 Orthogroups_2024-Update
PSME_00040898-RA No alias (at1g10650 : 137.0) SBP (S-ribonuclease binding protein)... 0.03 Orthogroups_2024-Update
Sobic.005G142101.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Solyc05g005210 No alias SBP (S-ribonuclease binding protein) family protein... 0.04 Orthogroups_2024-Update
Sopen10g025300 No alias hypothetical protein 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Predicted GO
MF GO:0017076 purine nucleotide binding IEP Predicted GO
MF GO:0032553 ribonucleotide binding IEP Predicted GO
MF GO:0032555 purine ribonucleotide binding IEP Predicted GO
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Predicted GO
MF GO:0036094 small molecule binding IEP Predicted GO
MF GO:0043168 anion binding IEP Predicted GO
MF GO:0043565 sequence-specific DNA binding IEP Predicted GO
MF GO:0097159 organic cyclic compound binding IEP Predicted GO
MF GO:0097367 carbohydrate derivative binding IEP Predicted GO
MF GO:1901265 nucleoside phosphate binding IEP Predicted GO
MF GO:1901363 heterocyclic compound binding IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!