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  5. Pp1s4_66V6

Pp1s4_66V6


Description : unknown [Picea sitchensis]


Gene families : OG_42_0000293 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000293_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Physcomitrella release: Pp1s4_66V6
Cluster HCCA clusters: Cluster_142

Target Alias Description ECC score Gene Family Method Actions
A4A49_15386 No alias protein trichome birefringence 0.04 Orthogroups_2024-Update
Glyma.09G109600 No alias Plant protein of unknown function (DUF828) 0.02 Orthogroups_2024-Update
Glyma.10G076000 No alias TRICHOME BIREFRINGENCE-LIKE 8 0.02 Orthogroups_2024-Update
Glyma.19G149100 No alias Plant protein of unknown function (DUF828) 0.03 Orthogroups_2024-Update
HORVU1Hr1G007630.1 No alias rhamnogalacturonan-I O-acetyltransferase *(TBL) 0.02 Orthogroups_2024-Update
MA_102045g0010 No alias (at5g06700 : 509.0) Encodes a member of the TBL... 0.03 Orthogroups_2024-Update
PSME_00040804-RA No alias (at5g19160 : 478.0) Encodes a member of the TBL... 0.03 Orthogroups_2024-Update
Pp1s390_21V6 No alias af361591_1 at5g06230 mbl20_11 0.04 Orthogroups_2024-Update
Sopen05g001120 No alias GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p 0.03 Orthogroups_2024-Update
Sopen10g029530 No alias GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Predicted GO
MF GO:0004674 protein serine/threonine kinase activity IEP Predicted GO
MF GO:0004683 calmodulin-dependent protein kinase activity IEP Predicted GO
MF GO:0004743 pyruvate kinase activity IEP Predicted GO
MF GO:0005488 binding IEP Predicted GO
MF GO:0005515 protein binding IEP Predicted GO
MF GO:0005516 calmodulin binding IEP Predicted GO
MF GO:0005543 phospholipid binding IEP Predicted GO
BP GO:0006464 cellular protein modification process IEP Predicted GO
MF GO:0008194 UDP-glycosyltransferase activity IEP Predicted GO
MF GO:0008375 acetylglucosaminyltransferase activity IEP Predicted GO
MF GO:0015298 solute:cation antiporter activity IEP Predicted GO
MF GO:0015299 solute:proton antiporter activity IEP Predicted GO
CC GO:0016021 integral component of membrane IEP Predicted GO
CC GO:0016459 myosin complex IEP Predicted GO
MF GO:0016740 transferase activity IEP Predicted GO
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Predicted GO
MF GO:0016758 transferase activity, transferring hexosyl groups IEP Predicted GO
MF GO:0022804 active transmembrane transporter activity IEP Predicted GO
MF GO:0030955 potassium ion binding IEP Predicted GO
CC GO:0031224 intrinsic component of membrane IEP Predicted GO
MF GO:0031420 alkali metal ion binding IEP Predicted GO
MF GO:0031625 ubiquitin protein ligase binding IEP Predicted GO
MF GO:0035091 phosphatidylinositol binding IEP Predicted GO
BP GO:0036211 protein modification process IEP Predicted GO
MF GO:0043167 ion binding IEP Predicted GO
MF GO:0043168 anion binding IEP Predicted GO
BP GO:0044248 cellular catabolic process IEP Predicted GO
MF GO:0044389 ubiquitin-like protein ligase binding IEP Predicted GO
MF GO:0071949 FAD binding IEP Predicted GO
InterPro domains Description Start Stop
IPR025846 PMR5_N_dom 179 231
IPR026057 PC-Esterase 232 521
No external refs found!