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  4. Sequence
  5. Solyc12g007040

Solyc12g007040


Description : LOW QUALITY:FKBP-like peptidyl-prolyl cis-trans isomerase family protein (AHRD V3.3 --* AT4G26555.2)


Gene families : OG_42_0003406 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0003406_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc12g007040
Cluster HCCA clusters: Cluster_22

Target Alias Description ECC score Gene Family Method Actions
A4A49_08815 No alias hypothetical protein 0.05 Orthogroups_2024-Update
Potri.001G180500 No alias Function unknown 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004003 ATP-dependent DNA helicase activity IEP Predicted GO
MF GO:0004674 protein serine/threonine kinase activity IEP Predicted GO
CC GO:0005759 mitochondrial matrix IEP Predicted GO
MF GO:0008026 ATP-dependent helicase activity IEP Predicted GO
BP GO:0008037 cell recognition IEP Predicted GO
MF GO:0008094 DNA-dependent ATPase activity IEP Predicted GO
BP GO:0022414 reproductive process IEP Predicted GO
BP GO:0022613 ribonucleoprotein complex biogenesis IEP Predicted GO
CC GO:0031974 membrane-enclosed lumen IEP Predicted GO
BP GO:0042254 ribosome biogenesis IEP Predicted GO
CC GO:0043233 organelle lumen IEP Predicted GO
BP GO:0044085 cellular component biogenesis IEP Predicted GO
MF GO:0047429 nucleoside-triphosphate diphosphatase activity IEP Predicted GO
BP GO:0048544 recognition of pollen IEP Predicted GO
CC GO:0070013 intracellular organelle lumen IEP Predicted GO
MF GO:0070035 purine NTP-dependent helicase activity IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!