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  5. Solyc12g007050

Solyc12g007050


Description : LOW QUALITY:Arabinogalactan peptide-like protein (AHRD V3.3 *** G7J699_MEDTR)


Gene families : OG_42_0001533 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001533_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc12g007050
Cluster HCCA clusters: Cluster_192

Target Alias Description ECC score Gene Family Method Actions
GRMZM2G002420 No alias arabinogalactan protein 16 0.04 Orthogroups_2024-Update
Glyma.04G238500 No alias arabinogalactan protein 16 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003860 3-hydroxyisobutyryl-CoA hydrolase activity IEP Predicted GO
MF GO:0004611 phosphoenolpyruvate carboxykinase activity IEP Predicted GO
MF GO:0004612 phosphoenolpyruvate carboxykinase (ATP) activity IEP Predicted GO
BP GO:0005996 monosaccharide metabolic process IEP Predicted GO
BP GO:0006006 glucose metabolic process IEP Predicted GO
BP GO:0006094 gluconeogenesis IEP Predicted GO
MF GO:0016289 CoA hydrolase activity IEP Predicted GO
MF GO:0016790 thiolester hydrolase activity IEP Predicted GO
BP GO:0019318 hexose metabolic process IEP Predicted GO
BP GO:0019319 hexose biosynthetic process IEP Predicted GO
BP GO:0046364 monosaccharide biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR009424 AGP16/20/22/41 31 65
No external refs found!