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  5. Pp1s509_13V6

Pp1s509_13V6


Description : zinc finger


Gene families : OG_42_0004508 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0004508_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Physcomitrella release: Pp1s509_13V6
Cluster HCCA clusters: Cluster_81

Target Alias Description ECC score Gene Family Method Actions
271535 No alias light-regulated zinc finger protein 1 0.03 Orthogroups_2024-Update
At1g06040 No alias B-box zinc finger protein 24... 0.03 Orthogroups_2024-Update
Bradi3g48180 No alias salt tolerance homologue 0.05 Orthogroups_2024-Update
Bradi5g14280 No alias B-box zinc finger family protein 0.02 Orthogroups_2024-Update
Brara.H02976.1 No alias BBX class-IV transcription factor 0.02 Orthogroups_2024-Update
Brara.I05427.1 No alias BBX class-IV transcription factor 0.04 Orthogroups_2024-Update
Brara.J00413.1 No alias BBX class-IV transcription factor 0.04 Orthogroups_2024-Update
GRMZM2G018876 No alias B-box zinc finger family protein 0.03 Orthogroups_2024-Update
Glyma.11G127100 No alias B-box zinc finger family protein 0.02 Orthogroups_2024-Update
Glyma.12G051700 No alias B-box zinc finger family protein 0.03 Orthogroups_2024-Update
Glyma.13G344700 No alias B-box zinc finger family protein 0.03 Orthogroups_2024-Update
Glyma.15G029500 No alias B-box zinc finger family protein 0.03 Orthogroups_2024-Update
HORVU2Hr1G085000.2 No alias Unknown function 0.02 Orthogroups_2024-Update
Potri.007G130100 No alias B-box zinc finger family protein 0.03 Orthogroups_2024-Update
Potri.017G028300 No alias B-box zinc finger family protein 0.02 Orthogroups_2024-Update
Seita.1G225000.1 No alias BBX class-IV transcription factor 0.04 Orthogroups_2024-Update
Seita.7G149800.1 No alias BBX class-IV transcription factor 0.05 Orthogroups_2024-Update
Sobic.004G208400.1 No alias BBX class-IV transcription factor 0.02 Orthogroups_2024-Update
Sobic.006G131800.1 No alias BBX class-IV transcription factor 0.04 Orthogroups_2024-Update
Solyc06g073180 No alias CONSTANS interacting protein 1 0.02 Orthogroups_2024-Update
Sopen06g029550 No alias B-box zinc finger 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0001871 pattern binding IEP Predicted GO
MF GO:0004177 aminopeptidase activity IEP Predicted GO
BP GO:0006810 transport IEP Predicted GO
BP GO:0006811 ion transport IEP Predicted GO
BP GO:0006812 cation transport IEP Predicted GO
MF GO:0008171 O-methyltransferase activity IEP Predicted GO
BP GO:0015969 guanosine tetraphosphate metabolic process IEP Predicted GO
MF GO:0016779 nucleotidyltransferase activity IEP Predicted GO
MF GO:0016868 intramolecular transferase activity, phosphotransferases IEP Predicted GO
BP GO:0019725 cellular homeostasis IEP Predicted GO
BP GO:0030001 metal ion transport IEP Predicted GO
MF GO:0030247 polysaccharide binding IEP Predicted GO
BP GO:0034035 purine ribonucleoside bisphosphate metabolic process IEP Predicted GO
CC GO:0034357 photosynthetic membrane IEP Predicted GO
BP GO:0042592 homeostatic process IEP Predicted GO
CC GO:0042651 thylakoid membrane IEP Predicted GO
BP GO:0045454 cell redox homeostasis IEP Predicted GO
BP GO:0051179 localization IEP Predicted GO
BP GO:0051234 establishment of localization IEP Predicted GO
BP GO:0065008 regulation of biological quality IEP Predicted GO
BP GO:1901068 guanosine-containing compound metabolic process IEP Predicted GO
MF GO:2001070 starch binding IEP Predicted GO
InterPro domains Description Start Stop
IPR000315 Znf_B-box 53 94
No external refs found!