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  5. Pp1s51_215V6

Pp1s51_215V6


Description : amp-dependent synthetase and ligase


Gene families : OG_42_0004830 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0004830_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Physcomitrella release: Pp1s51_215V6
Cluster HCCA clusters: Cluster_39

Target Alias Description ECC score Gene Family Method Actions
PSME_00006133-RA No alias (at1g30520 : 221.0) Encodes a chloroplast... 0.02 Orthogroups_2024-Update
PSME_00012413-RA No alias (at1g30520 : 188.0) Encodes a chloroplast... 0.05 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEP Predicted GO
InterPro domains Description Start Stop
IPR000873 AMP-dep_Synth/Lig 26 439
IPR025110 AMP-bd_C 448 553
No external refs found!