Solyc12g007320

Description : RING/U-box superfamily protein (AHRD V3.3 *** AT4G28890.1)

Gene families : OG_42_0002601 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002601_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Solanum release: Solyc12g007320
Cluster	HCCA clusters: Cluster_297

Target	Alias	Description	ECC score	Gene Family Method	Actions
Bradi1g33790	No alias	RING/U-box superfamily protein	0.02	Orthogroups_2024-Update
PSME_00056655-RA	No alias	(at5g05810 : 159.0) ATL43; FUNCTIONS IN: zinc ion...	0.04	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	IEA	InterProScan predictions
MF	GO:0008270	zinc ion binding	IEA	InterProScan predictions
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0005507	copper ion binding	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR001841	Znf_RING	130	173

External Links

No external refs found!