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  5. Pp1s51_262V6

Pp1s51_262V6


Description : hypothetical protein similar to Arabidopsis thaliana chromosome 1, F10C21_14 [Oryza sativa (japonica cultivar-group)]


Gene families : OG_42_0000483 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000483_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Physcomitrella release: Pp1s51_262V6
Cluster HCCA clusters: Cluster_41

Target Alias Description ECC score Gene Family Method Actions
A4A49_14499 No alias putative rna-binding protein arp1 0.02 Orthogroups_2024-Update
At1g20880 No alias RNA-binding (RRM/RBD/RNP motifs) family protein... 0.02 Orthogroups_2024-Update
At1g76460 No alias RNA-binding (RRM/RBD/RNP motifs) family protein... 0.03 Orthogroups_2024-Update
Brara.G01084.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Brara.G03445.1 No alias Unknown function 0.04 Orthogroups_2024-Update
LOC_Os01g72834 No alias RNA recognition motif containing protein, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os02g51890 No alias RNA recognition motif containing protein, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os03g17760 No alias RNA recognition motif containing protein, putative, expressed 0.02 Orthogroups_2024-Update
PSME_00020345-RA No alias (at1g76460 : 149.0) RNA-binding (RRM/RBD/RNP motifs)... 0.02 Orthogroups_2024-Update
PSME_00042532-RA No alias (at1g76460 : 159.0) RNA-binding (RRM/RBD/RNP motifs)... 0.02 Orthogroups_2024-Update
Seita.1G325400.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Sobic.003G375000.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Solyc02g082270 No alias RNA binding protein, putative (AHRD V3.3 *** B9R8T5_RICCO) 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP Predicted GO
MF GO:0003993 acid phosphatase activity IEP Predicted GO
MF GO:0004066 asparagine synthase (glutamine-hydrolyzing) activity IEP Predicted GO
MF GO:0004392 heme oxygenase (decyclizing) activity IEP Predicted GO
MF GO:0004418 hydroxymethylbilane synthase activity IEP Predicted GO
MF GO:0004435 phosphatidylinositol phospholipase C activity IEP Predicted GO
MF GO:0004555 alpha,alpha-trehalase activity IEP Predicted GO
MF GO:0004620 phospholipase activity IEP Predicted GO
MF GO:0004629 phospholipase C activity IEP Predicted GO
BP GO:0005975 carbohydrate metabolic process IEP Predicted GO
BP GO:0005984 disaccharide metabolic process IEP Predicted GO
BP GO:0005991 trehalose metabolic process IEP Predicted GO
BP GO:0005992 trehalose biosynthetic process IEP Predicted GO
BP GO:0006528 asparagine metabolic process IEP Predicted GO
BP GO:0006529 asparagine biosynthetic process IEP Predicted GO
BP GO:0006720 isoprenoid metabolic process IEP Predicted GO
BP GO:0006721 terpenoid metabolic process IEP Predicted GO
BP GO:0006778 porphyrin-containing compound metabolic process IEP Predicted GO
BP GO:0006788 heme oxidation IEP Predicted GO
BP GO:0006950 response to stress IEP Predicted GO
BP GO:0006952 defense response IEP Predicted GO
MF GO:0008081 phosphoric diester hydrolase activity IEP Predicted GO
BP GO:0008150 biological_process IEP Predicted GO
BP GO:0008299 isoprenoid biosynthetic process IEP Predicted GO
MF GO:0008661 1-deoxy-D-xylulose-5-phosphate synthase activity IEP Predicted GO
BP GO:0009058 biosynthetic process IEP Predicted GO
BP GO:0009066 aspartate family amino acid metabolic process IEP Predicted GO
BP GO:0009067 aspartate family amino acid biosynthetic process IEP Predicted GO
BP GO:0009311 oligosaccharide metabolic process IEP Predicted GO
BP GO:0009312 oligosaccharide biosynthetic process IEP Predicted GO
MF GO:0015927 trehalase activity IEP Predicted GO
BP GO:0016051 carbohydrate biosynthetic process IEP Predicted GO
BP GO:0016114 terpenoid biosynthetic process IEP Predicted GO
MF GO:0016298 lipase activity IEP Predicted GO
MF GO:0016744 transferase activity, transferring aldehyde or ketonic groups IEP Predicted GO
MF GO:0016787 hydrolase activity IEP Predicted GO
MF GO:0016884 carbon-nitrogen ligase activity, with glutamine as amido-N-donor IEP Predicted GO
BP GO:0030001 metal ion transport IEP Predicted GO
BP GO:0033013 tetrapyrrole metabolic process IEP Predicted GO
BP GO:0033014 tetrapyrrole biosynthetic process IEP Predicted GO
BP GO:0034637 cellular carbohydrate biosynthetic process IEP Predicted GO
BP GO:0042168 heme metabolic process IEP Predicted GO
BP GO:0042440 pigment metabolic process IEP Predicted GO
MF GO:0042578 phosphoric ester hydrolase activity IEP Predicted GO
BP GO:0044249 cellular biosynthetic process IEP Predicted GO
BP GO:0044262 cellular carbohydrate metabolic process IEP Predicted GO
BP GO:0046351 disaccharide biosynthetic process IEP Predicted GO
BP GO:0050896 response to stimulus IEP Predicted GO
BP GO:0071704 organic substance metabolic process IEP Predicted GO
BP GO:1901576 organic substance biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR000504 RRM_dom 27 83
No external refs found!