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  5. Pp1s51_33V6

Pp1s51_33V6


Description : F27M3.14; bystin family [Arabidopsis thaliana]


Gene families : OG_42_0005877 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0005877_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Physcomitrella release: Pp1s51_33V6
Cluster HCCA clusters: Cluster_82

Target Alias Description ECC score Gene Family Method Actions
Bradi5g26400 No alias Function unknown 0.05 Orthogroups_2024-Update
Brara.G00543.1 No alias SSU processome assembly factor *(ENP1) 0.06 Orthogroups_2024-Update
Cre01.g063267 No alias Function unknown 0.03 Orthogroups_2024-Update
GRMZM2G052178 No alias Function unknown 0.03 Orthogroups_2024-Update
Seita.3G013300.1 No alias SSU processome assembly factor *(ENP1) 0.04 Orthogroups_2024-Update
Sobic.006G269900.1 No alias SSU processome assembly factor *(ENP1) 0.03 Orthogroups_2024-Update
Solyc07g056550 No alias bystin-like protein (AHRD V3.3 *** AT1G31660.1) 0.03 Orthogroups_2024-Update
Sopen07g029910 No alias Bystin 0.03 Orthogroups_2024-Update
evm.model.contig_3557.2 No alias (at1g31660 : 275.0) CONTAINS InterPro DOMAIN/s: Bystin... 0.03 Orthogroups_2024-Update
evm.model.tig00000829.16 No alias (at1g31660 : 299.0) CONTAINS InterPro DOMAIN/s: Bystin... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003916 DNA topoisomerase activity IEP Predicted GO
MF GO:0003917 DNA topoisomerase type I activity IEP Predicted GO
MF GO:0005488 binding IEP Predicted GO
CC GO:0005634 nucleus IEP Predicted GO
CC GO:0005694 chromosome IEP Predicted GO
BP GO:0006265 DNA topological change IEP Predicted GO
BP GO:0006334 nucleosome assembly IEP Predicted GO
BP GO:0006996 organelle organization IEP Predicted GO
BP GO:0010564 regulation of cell cycle process IEP Predicted GO
BP GO:0016043 cellular component organization IEP Predicted GO
BP GO:0017003 protein-heme linkage IEP Predicted GO
BP GO:0017004 cytochrome complex assembly IEP Predicted GO
BP GO:0017006 protein-tetrapyrrole linkage IEP Predicted GO
BP GO:0022603 regulation of anatomical structure morphogenesis IEP Predicted GO
BP GO:0022607 cellular component assembly IEP Predicted GO
BP GO:0022613 ribonucleoprotein complex biogenesis IEP Predicted GO
BP GO:0022618 ribonucleoprotein complex assembly IEP Predicted GO
BP GO:0032465 regulation of cytokinesis IEP Predicted GO
BP GO:0032954 regulation of cytokinetic process IEP Predicted GO
BP GO:0032955 regulation of division septum assembly IEP Predicted GO
BP GO:0034622 cellular protein-containing complex assembly IEP Predicted GO
BP GO:0034728 nucleosome organization IEP Predicted GO
BP GO:0042254 ribosome biogenesis IEP Predicted GO
BP GO:0042255 ribosome assembly IEP Predicted GO
BP GO:0042256 mature ribosome assembly IEP Predicted GO
MF GO:0043021 ribonucleoprotein complex binding IEP Predicted GO
MF GO:0043022 ribosome binding IEP Predicted GO
CC GO:0043226 organelle IEP Predicted GO
CC GO:0043227 membrane-bounded organelle IEP Predicted GO
CC GO:0043229 intracellular organelle IEP Predicted GO
CC GO:0043231 intracellular membrane-bounded organelle IEP Predicted GO
BP GO:0043933 protein-containing complex subunit organization IEP Predicted GO
BP GO:0044087 regulation of cellular component biogenesis IEP Predicted GO
MF GO:0044877 protein-containing complex binding IEP Predicted GO
BP GO:0045765 regulation of angiogenesis IEP Predicted GO
BP GO:0050793 regulation of developmental process IEP Predicted GO
BP GO:0051128 regulation of cellular component organization IEP Predicted GO
BP GO:0051239 regulation of multicellular organismal process IEP Predicted GO
BP GO:0051301 cell division IEP Predicted GO
BP GO:0051302 regulation of cell division IEP Predicted GO
BP GO:0051726 regulation of cell cycle IEP Predicted GO
BP GO:0065003 protein-containing complex assembly IEP Predicted GO
BP GO:0065004 protein-DNA complex assembly IEP Predicted GO
BP GO:0070070 proton-transporting V-type ATPase complex assembly IEP Predicted GO
BP GO:0070071 proton-transporting two-sector ATPase complex assembly IEP Predicted GO
BP GO:0070072 vacuolar proton-transporting V-type ATPase complex assembly IEP Predicted GO
BP GO:0070925 organelle assembly IEP Predicted GO
BP GO:0071103 DNA conformation change IEP Predicted GO
BP GO:0071824 protein-DNA complex subunit organization IEP Predicted GO
BP GO:0071826 ribonucleoprotein complex subunit organization IEP Predicted GO
BP GO:0071840 cellular component organization or biogenesis IEP Predicted GO
BP GO:1901342 regulation of vasculature development IEP Predicted GO
BP GO:1901891 regulation of cell septum assembly IEP Predicted GO
BP GO:2000026 regulation of multicellular organismal development IEP Predicted GO
InterPro domains Description Start Stop
IPR007955 Bystin 152 292
IPR007955 Bystin 84 145
No external refs found!