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Description : RING/U-box superfamily protein (AHRD V3.3 *-* AT1G60360.1)
Gene families : OG_42_0000043 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000043_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Solanum release: Solyc12g008480 | |
| Cluster | HCCA clusters: Cluster_175 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| A4A49_24130 | No alias | e3 ubiquitin-protein ligase ring1-like protein | 0.03 | Orthogroups_2024-Update | |
| A4A49_41488 | No alias | e3 ubiquitin-protein ligase rduf1 | 0.02 | Orthogroups_2024-Update | |
| At3g13228 | No alias | RING/U-box superfamily protein... | 0.03 | Orthogroups_2024-Update | |
| Bradi3g37800 | No alias | RING/U-box superfamily protein | 0.03 | Orthogroups_2024-Update | |
| Brara.C02094.1 | No alias | RING-H2-class BTL-subclass E3 ubiquitin ligase | 0.03 | Orthogroups_2024-Update | |
| GRMZM2G164358 | No alias | RING-H2 finger C1A | 0.02 | Orthogroups_2024-Update | |
| Glyma.04G251600 | No alias | RING/U-box superfamily protein | 0.03 | Orthogroups_2024-Update | |
| Glyma.14G105900 | No alias | RING/U-box superfamily protein | 0.03 | Orthogroups_2024-Update | |
| HORVU0Hr1G019650.1 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
| LOC_Os02g09820 | No alias | zinc finger, C3HC4 type domain containing protein, expressed | 0.03 | Orthogroups_2024-Update | |
| LOC_Os12g02620 | No alias | zinc finger, C3HC4 type domain containing protein, expressed | 0.02 | Orthogroups_2024-Update | |
| MA_79051g0010 | No alias | (at3g19950 : 171.0) RING/U-box superfamily protein;... | 0.03 | Orthogroups_2024-Update | |
| Potri.008G087200 | No alias | RING/U-box superfamily protein | 0.04 | Orthogroups_2024-Update | |
| Potri.012G065300 | No alias | RING/U-box superfamily protein | 0.03 | Orthogroups_2024-Update | |
| Seita.1G054700.1 | No alias | Unknown function | 0.04 | Orthogroups_2024-Update | |
| Seita.4G253600.1 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
| Seita.8G172700.1 | No alias | Unknown function | 0.02 | Orthogroups_2024-Update | |
| Seita.9G403200.1 | No alias | RING-H2-class BTL-subclass E3 ubiquitin ligase | 0.02 | Orthogroups_2024-Update | |
| Sobic.005G165900.1 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
| Solyc08g067290 | No alias | RING/U-box superfamily protein (AHRD V3.3 *** AT5G20910.1) | 0.05 | Orthogroups_2024-Update | |
| Sopen05g003750 | No alias | Ring finger domain | 0.03 | Orthogroups_2024-Update |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0005515 | protein binding | IEA | InterProScan predictions |
| MF | GO:0008270 | zinc ion binding | IEA | InterProScan predictions |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000413 | protein peptidyl-prolyl isomerization | IEP | Predicted GO |
| MF | GO:0003755 | peptidyl-prolyl cis-trans isomerase activity | IEP | Predicted GO |
| MF | GO:0005096 | GTPase activator activity | IEP | Predicted GO |
| MF | GO:0008047 | enzyme activator activity | IEP | Predicted GO |
| MF | GO:0010333 | terpene synthase activity | IEP | Predicted GO |
| MF | GO:0016859 | cis-trans isomerase activity | IEP | Predicted GO |
| BP | GO:0018208 | peptidyl-proline modification | IEP | Predicted GO |
| MF | GO:0030695 | GTPase regulator activity | IEP | Predicted GO |
| MF | GO:0060589 | nucleoside-triphosphatase regulator activity | IEP | Predicted GO |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR001841 | Znf_RING | 61 | 104 |
| No external refs found! |