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  5. Pp1s52_231V6

Pp1s52_231V6


Description : homeodomain transcription factor


Gene families : OG_42_0000158 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000158_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Physcomitrella release: Pp1s52_231V6
Cluster HCCA clusters: Cluster_88

Target Alias Description ECC score Gene Family Method Actions
A4A49_29017 No alias homeobox protein bel1-like protein 0.03 Orthogroups_2024-Update
Brara.J02909.1 No alias BEL-type transcription factor 0.02 Orthogroups_2024-Update
Glyma.06G029100 No alias BEL1-like homeodomain 3 0.02 Orthogroups_2024-Update
LOC_Os03g03260 No alias homeobox domain containing protein, expressed 0.02 Orthogroups_2024-Update
Seita.3G220700.1 No alias BEL-type transcription factor 0.03 Orthogroups_2024-Update
Solyc09g011380 No alias BEL1-like homeodomain protein (AHRD V3.3 *** G7L5K2_MEDTR) 0.03 Orthogroups_2024-Update
Solyc11g069890 No alias BEL1-like homeodomain 8, putative (AHRD V3.3 ***... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA InterProScan predictions
BP GO:0006355 regulation of transcription, DNA-templated IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0000062 fatty-acyl-CoA binding IEP Predicted GO
BP GO:0000226 microtubule cytoskeleton organization IEP Predicted GO
BP GO:0006996 organelle organization IEP Predicted GO
BP GO:0007010 cytoskeleton organization IEP Predicted GO
BP GO:0007017 microtubule-based process IEP Predicted GO
BP GO:0007051 spindle organization IEP Predicted GO
MF GO:0008658 penicillin binding IEP Predicted GO
BP GO:0022402 cell cycle process IEP Predicted GO
BP GO:0031023 microtubule organizing center organization IEP Predicted GO
MF GO:0031406 carboxylic acid binding IEP Predicted GO
MF GO:0033218 amide binding IEP Predicted GO
MF GO:0033293 monocarboxylic acid binding IEP Predicted GO
MF GO:0043177 organic acid binding IEP Predicted GO
BP GO:0051225 spindle assembly IEP Predicted GO
BP GO:0070925 organelle assembly IEP Predicted GO
MF GO:1901567 fatty acid derivative binding IEP Predicted GO
MF GO:1901681 sulfur compound binding IEP Predicted GO
InterPro domains Description Start Stop
IPR008422 Homeobox_KN_domain 601 640
IPR006563 POX_dom 373 547
No external refs found!