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  5. Pp1s54_118V6

Pp1s54_118V6


Description : solanesyl diphosphate synthase


Gene families : OG_42_0004049 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0004049_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Physcomitrella release: Pp1s54_118V6
Cluster HCCA clusters: Cluster_27

Target Alias Description ECC score Gene Family Method Actions
At1g78510 No alias Solanesyl diphosphate synthase 1... 0.07 Orthogroups_2024-Update
Bradi2g15307 No alias solanesyl diphosphate synthase 2 0.06 Orthogroups_2024-Update
Bradi4g39197 No alias solanesyl diphosphate synthase 2 0.04 Orthogroups_2024-Update
Brara.F01193.1 No alias solanesyl diphosphate synthase *(SPS1/2) & EC_2.5... 0.03 Orthogroups_2024-Update
Brara.G03590.1 No alias solanesyl diphosphate synthase *(SPS1/2) & EC_2.5... 0.03 Orthogroups_2024-Update
Cre13.g565650 No alias solanesyl diphosphate synthase 1 0.05 Orthogroups_2024-Update
GRMZM2G163809 No alias solanesyl diphosphate synthase 2 0.02 Orthogroups_2024-Update
Glyma.13G262200 No alias solanesyl diphosphate synthase 1 0.08 Orthogroups_2024-Update
Glyma.15G243100 No alias solanesyl diphosphate synthase 1 0.07 Orthogroups_2024-Update
HORVU1Hr1G091880.1 No alias solanesyl diphosphate synthase *(SPS1/2) & EC_2.5... 0.04 Orthogroups_2024-Update
Kfl00662_0030 kfl00662_0030_v1.... (at1g78510 : 381.0) Encodes a protein with solanesyl... 0.03 Orthogroups_2024-Update
LOC_Os05g50550 No alias polyprenyl synthetase, putative, expressed 0.02 Orthogroups_2024-Update
Sobic.008G088821.1 No alias solanesyl diphosphate synthase *(SPS1/2) & EC_2.5... 0.02 Orthogroups_2024-Update
Sobic.009G246400.1 No alias solanesyl diphosphate synthase *(SPS1/2) & EC_2.5... 0.03 Orthogroups_2024-Update
Solyc07g061990 No alias solanesyl diphosphate synthase 0.05 Orthogroups_2024-Update
Sopen07g030260 No alias Polyprenyl synthetase 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0008299 isoprenoid biosynthetic process IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0000041 transition metal ion transport IEP Predicted GO
MF GO:0000166 nucleotide binding IEP Predicted GO
BP GO:0000272 polysaccharide catabolic process IEP Predicted GO
MF GO:0004014 adenosylmethionine decarboxylase activity IEP Predicted GO
MF GO:0005381 iron ion transmembrane transporter activity IEP Predicted GO
CC GO:0005779 integral component of peroxisomal membrane IEP Predicted GO
BP GO:0005976 polysaccharide metabolic process IEP Predicted GO
BP GO:0006576 cellular biogenic amine metabolic process IEP Predicted GO
BP GO:0006595 polyamine metabolic process IEP Predicted GO
BP GO:0006596 polyamine biosynthetic process IEP Predicted GO
BP GO:0006597 spermine biosynthetic process IEP Predicted GO
BP GO:0006771 riboflavin metabolic process IEP Predicted GO
BP GO:0006826 iron ion transport IEP Predicted GO
BP GO:0008215 spermine metabolic process IEP Predicted GO
BP GO:0008216 spermidine metabolic process IEP Predicted GO
BP GO:0008295 spermidine biosynthetic process IEP Predicted GO
MF GO:0008686 3,4-dihydroxy-2-butanone-4-phosphate synthase activity IEP Predicted GO
BP GO:0009057 macromolecule catabolic process IEP Predicted GO
BP GO:0009231 riboflavin biosynthetic process IEP Predicted GO
BP GO:0009309 amine biosynthetic process IEP Predicted GO
MF GO:0010181 FMN binding IEP Predicted GO
BP GO:0016052 carbohydrate catabolic process IEP Predicted GO
MF GO:0016160 amylase activity IEP Predicted GO
MF GO:0016161 beta-amylase activity IEP Predicted GO
BP GO:0016559 peroxisome fission IEP Predicted GO
MF GO:0016830 carbon-carbon lyase activity IEP Predicted GO
CC GO:0031231 intrinsic component of peroxisomal membrane IEP Predicted GO
CC GO:0031300 intrinsic component of organelle membrane IEP Predicted GO
CC GO:0031301 integral component of organelle membrane IEP Predicted GO
MF GO:0032553 ribonucleotide binding IEP Predicted GO
BP GO:0034755 iron ion transmembrane transport IEP Predicted GO
MF GO:0036094 small molecule binding IEP Predicted GO
BP GO:0042401 cellular biogenic amine biosynthetic process IEP Predicted GO
BP GO:0042726 flavin-containing compound metabolic process IEP Predicted GO
BP GO:0042727 flavin-containing compound biosynthetic process IEP Predicted GO
MF GO:0043167 ion binding IEP Predicted GO
MF GO:0043168 anion binding IEP Predicted GO
BP GO:0044106 cellular amine metabolic process IEP Predicted GO
CC GO:0044438 microbody part IEP Predicted GO
CC GO:0044439 peroxisomal part IEP Predicted GO
MF GO:0046915 transition metal ion transmembrane transporter activity IEP Predicted GO
BP GO:0048285 organelle fission IEP Predicted GO
MF GO:0050662 coenzyme binding IEP Predicted GO
BP GO:0055114 oxidation-reduction process IEP Predicted GO
BP GO:0097164 ammonium ion metabolic process IEP Predicted GO
MF GO:0097367 carbohydrate derivative binding IEP Predicted GO
MF GO:1901265 nucleoside phosphate binding IEP Predicted GO
InterPro domains Description Start Stop
IPR000092 Polyprenyl_synt 176 421
No external refs found!