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  5. Solyc01g100100

Solyc01g100100


Description : RING/U-box superfamily protein, putative (AHRD V3.3 *** A0A061E1W0_THECC)


Gene families : OG_42_0000003 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc01g100100
Cluster HCCA clusters: Cluster_17

Target Alias Description ECC score Gene Family Method Actions
A4A49_20151 No alias putative ring-h2 finger protein atl61 0.03 Orthogroups_2024-Update
A4A49_24557 No alias ring-h2 finger protein atl73 0.03 Orthogroups_2024-Update
A4A49_30300 No alias ring-h2 finger protein atl54 0.04 Orthogroups_2024-Update
A4A49_31261 No alias ring-h2 finger protein atl70 0.04 Orthogroups_2024-Update
At1g20823 No alias RING-H2 finger protein ATL80... 0.03 Orthogroups_2024-Update
At1g49210 No alias E3 ubiquitin-protein ligase ATL76... 0.01 Orthogroups_2024-Update
At3g11110 No alias RING-H2 finger protein ATL66... 0.03 Orthogroups_2024-Update
At4g10150 No alias RING-H2 finger protein ATL7... 0.03 Orthogroups_2024-Update
At5g01880 No alias RING-H2 finger protein ATL74... 0.03 Orthogroups_2024-Update
At5g17600 No alias RING-H2 finger protein ATL52... 0.03 Orthogroups_2024-Update
At5g47610 No alias At5g47610 [Source:UniProtKB/TrEMBL;Acc:Q1H5E6] 0.03 Orthogroups_2024-Update
Bradi3g45270 No alias RING/U-box superfamily protein 0.02 Orthogroups_2024-Update
Bradi4g37430 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
Brara.C03704.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.02 Orthogroups_2024-Update
Brara.F01484.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.04 Orthogroups_2024-Update
Brara.F03530.1 No alias Unknown function 0.05 Orthogroups_2024-Update
Brara.G03437.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.02 Orthogroups_2024-Update
GRMZM2G050774 No alias RING/U-box superfamily protein 0.02 Orthogroups_2024-Update
GRMZM2G135011 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
GRMZM2G171277 No alias RING/U-box superfamily protein 0.02 Orthogroups_2024-Update
GRMZM2G480106 No alias RING/U-box superfamily protein 0.02 Orthogroups_2024-Update
Glyma.07G078800 No alias RING/U-box superfamily protein 0.04 Orthogroups_2024-Update
HORVU1Hr1G053130.1 No alias Unknown function 0.02 Orthogroups_2024-Update
HORVU1Hr1G082030.1 No alias Unknown function 0.03 Orthogroups_2024-Update
HORVU3Hr1G072730.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.03 Orthogroups_2024-Update
HORVU5Hr1G079940.1 No alias Unknown function 0.02 Orthogroups_2024-Update
HORVU6Hr1G077610.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.03 Orthogroups_2024-Update
HORVU7Hr1G121010.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.02 Orthogroups_2024-Update
LOC_Os03g28080 No alias ring-H2 zinc finger protein, putative, expressed 0.03 Orthogroups_2024-Update
MA_114175g0010 No alias (at3g16720 : 124.0) RING-H2 protein induced after... 0.02 Orthogroups_2024-Update
MA_41514g0010 No alias (at5g01880 : 91.3) RING/U-box superfamily protein;... 0.04 Orthogroups_2024-Update
Potri.004G209600 No alias RING/U-box superfamily protein 0.02 Orthogroups_2024-Update
Potri.005G160900 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
Potri.005G244800 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
Potri.007G057300 No alias RING-H2 finger A3A 0.03 Orthogroups_2024-Update
Potri.007G111900 No alias RING/U-box superfamily protein 0.04 Orthogroups_2024-Update
Pp1s102_105V6 No alias ring finger 0.02 Orthogroups_2024-Update
Pp1s257_3V6 No alias ac009177_16 ring-h2 zinc finger protein atl6 0.02 Orthogroups_2024-Update
Seita.1G203900.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.04 Orthogroups_2024-Update
Seita.2G087800.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Seita.2G390800.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Seita.4G172100.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Seita.9G336200.1 No alias Unknown function 0.05 Orthogroups_2024-Update
Sobic.004G279000.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.01 Orthogroups_2024-Update
Sobic.004G358200.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.02 Orthogroups_2024-Update
Sobic.009G056600.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.03 Orthogroups_2024-Update
Sobic.009G110200.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Sobic.009G110500.2 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.03 Orthogroups_2024-Update
Solyc11g073170 No alias LOW QUALITY:RING/U-box superfamily protein, putative... 0.03 Orthogroups_2024-Update
Sopen03g041450 No alias Ring finger domain 0.04 Orthogroups_2024-Update
Sopen08g025350 No alias Ring finger domain 0.03 Orthogroups_2024-Update
Sopen11g001300 No alias Ring finger domain 0.03 Orthogroups_2024-Update
Sopen12g029900 No alias Ring finger domain 0.02 Orthogroups_2024-Update
evm.model.tig00020563.21 No alias no hits & (original description: no original description) 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
MF GO:0008270 zinc ion binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003839 gamma-glutamylcyclotransferase activity IEP Predicted GO
MF GO:0004014 adenosylmethionine decarboxylase activity IEP Predicted GO
CC GO:0005622 intracellular IEP Predicted GO
BP GO:0006576 cellular biogenic amine metabolic process IEP Predicted GO
BP GO:0006595 polyamine metabolic process IEP Predicted GO
BP GO:0006596 polyamine biosynthetic process IEP Predicted GO
BP GO:0006597 spermine biosynthetic process IEP Predicted GO
BP GO:0006749 glutathione metabolic process IEP Predicted GO
BP GO:0006751 glutathione catabolic process IEP Predicted GO
BP GO:0008215 spermine metabolic process IEP Predicted GO
BP GO:0008216 spermidine metabolic process IEP Predicted GO
BP GO:0008295 spermidine biosynthetic process IEP Predicted GO
BP GO:0009309 amine biosynthetic process IEP Predicted GO
MF GO:0016746 transferase activity, transferring acyl groups IEP Predicted GO
MF GO:0016747 transferase activity, transferring acyl groups other than amino-acyl groups IEP Predicted GO
MF GO:0016829 lyase activity IEP Predicted GO
MF GO:0016837 carbon-oxygen lyase activity, acting on polysaccharides IEP Predicted GO
MF GO:0016842 amidine-lyase activity IEP Predicted GO
MF GO:0030570 pectate lyase activity IEP Predicted GO
BP GO:0042219 cellular modified amino acid catabolic process IEP Predicted GO
BP GO:0042401 cellular biogenic amine biosynthetic process IEP Predicted GO
BP GO:0043171 peptide catabolic process IEP Predicted GO
BP GO:0044106 cellular amine metabolic process IEP Predicted GO
BP GO:0044273 sulfur compound catabolic process IEP Predicted GO
BP GO:0051187 cofactor catabolic process IEP Predicted GO
BP GO:0097164 ammonium ion metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR001841 Znf_RING 47 91
No external refs found!