Solyc12g008900


Description : cytokinin oxidase6


Gene families : OG_42_0000398 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000398_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc12g008900
Cluster HCCA clusters: Cluster_31

Target Alias Description ECC score Gene Family Method Actions
Brara.B00939.1 No alias cytokinin dehydrogenase *(CKX) & EC_1.5 oxidoreductase... 0.03 Orthogroups_2024-Update
Brara.I01123.1 No alias cytokinin dehydrogenase *(CKX) & EC_1.5 oxidoreductase... 0.05 Orthogroups_2024-Update
GRMZM2G167220 No alias cytokinin oxidase/dehydrogenase 1 0.03 Orthogroups_2024-Update
Glyma.06G028900 No alias cytokinin oxidase 5 0.05 Orthogroups_2024-Update
HORVU1Hr1G057860.6 No alias cytokinin dehydrogenase *(CKX) & EC_1.5 oxidoreductase... 0.03 Orthogroups_2024-Update
HORVU3Hr1G075920.1 No alias cytokinin dehydrogenase *(CKX) & EC_1.5 oxidoreductase... 0.03 Orthogroups_2024-Update
Potri.006G221000 No alias cytokinin oxidase 7 0.03 Orthogroups_2024-Update
Sobic.003G421100.1 No alias EC_1.5 oxidoreductase acting on CH-NH group of donor &... 0.03 Orthogroups_2024-Update
Sobic.004G094000.1 No alias cytokinin dehydrogenase *(CKX) & EC_1.5 oxidoreductase... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0009690 cytokinin metabolic process IEA InterProScan predictions
MF GO:0016491 oxidoreductase activity IEA InterProScan predictions
MF GO:0019139 cytokinin dehydrogenase activity IEA InterProScan predictions
MF GO:0050660 flavin adenine dinucleotide binding IEA InterProScan predictions
BP GO:0055114 oxidation-reduction process IEA InterProScan predictions
Type GO Term Name Evidence Source
MF GO:0004143 diacylglycerol kinase activity IEP Predicted GO
MF GO:0004650 polygalacturonase activity IEP Predicted GO
BP GO:0006397 mRNA processing IEP Predicted GO
BP GO:0007186 G protein-coupled receptor signaling pathway IEP Predicted GO
BP GO:0007205 protein kinase C-activating G protein-coupled receptor signaling pathway IEP Predicted GO
MF GO:0008233 peptidase activity IEP Predicted GO
MF GO:0008236 serine-type peptidase activity IEP Predicted GO
BP GO:0010215 cellulose microfibril organization IEP Predicted GO
BP GO:0016049 cell growth IEP Predicted GO
MF GO:0017171 serine hydrolase activity IEP Predicted GO
BP GO:0030198 extracellular matrix organization IEP Predicted GO
CC GO:0031224 intrinsic component of membrane IEP Predicted GO
CC GO:0031225 anchored component of membrane IEP Predicted GO
BP GO:0040007 growth IEP Predicted GO
BP GO:0043062 extracellular structure organization IEP Predicted GO
MF GO:0070011 peptidase activity, acting on L-amino acid peptides IEP Predicted GO
InterPro domains Description Start Stop
IPR006094 Oxid_FAD_bind_N 71 219
IPR015345 Cytokinin_DH_FAD/cytokin-bd 251 526
No external refs found!