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  5. Pp1s54_52V6

Pp1s54_52V6


Description : pyridoxine biosynthesis protein


Gene families : OG_42_0002804 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002804_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Physcomitrella release: Pp1s54_52V6
Cluster HCCA clusters: Cluster_27

Target Alias Description ECC score Gene Family Method Actions
146305 No alias Aldolase-type TIM barrel family protein 0.07 Orthogroups_2024-Update
At3g16050 No alias Pyridoxal 5'-phosphate synthase-like subunit PDX1.2... 0.02 Orthogroups_2024-Update
Cre15.g643550 No alias Aldolase-type TIM barrel family protein 0.01 Orthogroups_2024-Update
Kfl00325_0080 kfl00325_0080_v1.1 (q9at63|pdx1_ginbi : 466.0) Pyridoxin biosynthesis... 0.02 Orthogroups_2024-Update
MA_10426564g0020 No alias (q9at63|pdx1_ginbi : 378.0) Pyridoxin biosynthesis... 0.02 Orthogroups_2024-Update
MA_10426564g0030 No alias (q9at63|pdx1_ginbi : 473.0) Pyridoxin biosynthesis... 0.02 Orthogroups_2024-Update
Mp2g20880.1 No alias synthase component of pyridoxal 5-phosphate synthase complex 0.03 Orthogroups_2024-Update
PSME_00011509-RA No alias (q9at63|pdx1_ginbi : 345.0) Pyridoxin biosynthesis... 0.03 Orthogroups_2024-Update
Potri.016G116400 No alias Aldolase-type TIM barrel family protein 0.03 Orthogroups_2024-Update
Pp1s240_28V6 No alias pyridoxine biosynthesis protein 0.02 Orthogroups_2024-Update
Seita.J005500.1 No alias synthase component of pyridoxal 5-phosphate synthase complex 0.02 Orthogroups_2024-Update
Solyc06g081980 No alias Pyridoxal biosynthesis protein PDX1-like protein (AHRD... 0.02 Orthogroups_2024-Update
evm.model.tig00000254.47 No alias (q9at63|pdx1_ginbi : 396.0) Pyridoxin biosynthesis... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000041 transition metal ion transport IEP Predicted GO
MF GO:0000155 phosphorelay sensor kinase activity IEP Predicted GO
BP GO:0000160 phosphorelay signal transduction system IEP Predicted GO
MF GO:0000166 nucleotide binding IEP Predicted GO
BP GO:0000272 polysaccharide catabolic process IEP Predicted GO
MF GO:0001882 nucleoside binding IEP Predicted GO
MF GO:0001883 purine nucleoside binding IEP Predicted GO
MF GO:0003824 catalytic activity IEP Predicted GO
MF GO:0004014 adenosylmethionine decarboxylase activity IEP Predicted GO
MF GO:0004175 endopeptidase activity IEP Predicted GO
MF GO:0004222 metalloendopeptidase activity IEP Predicted GO
MF GO:0004673 protein histidine kinase activity IEP Predicted GO
MF GO:0005381 iron ion transmembrane transporter activity IEP Predicted GO
MF GO:0005525 GTP binding IEP Predicted GO
BP GO:0006576 cellular biogenic amine metabolic process IEP Predicted GO
BP GO:0006595 polyamine metabolic process IEP Predicted GO
BP GO:0006596 polyamine biosynthetic process IEP Predicted GO
BP GO:0006597 spermine biosynthetic process IEP Predicted GO
BP GO:0006629 lipid metabolic process IEP Predicted GO
BP GO:0006720 isoprenoid metabolic process IEP Predicted GO
BP GO:0006771 riboflavin metabolic process IEP Predicted GO
BP GO:0006826 iron ion transport IEP Predicted GO
BP GO:0008215 spermine metabolic process IEP Predicted GO
BP GO:0008216 spermidine metabolic process IEP Predicted GO
MF GO:0008237 metallopeptidase activity IEP Predicted GO
BP GO:0008295 spermidine biosynthetic process IEP Predicted GO
BP GO:0008299 isoprenoid biosynthetic process IEP Predicted GO
BP GO:0008610 lipid biosynthetic process IEP Predicted GO
MF GO:0008686 3,4-dihydroxy-2-butanone-4-phosphate synthase activity IEP Predicted GO
BP GO:0009231 riboflavin biosynthetic process IEP Predicted GO
BP GO:0009309 amine biosynthetic process IEP Predicted GO
MF GO:0010181 FMN binding IEP Predicted GO
MF GO:0016160 amylase activity IEP Predicted GO
MF GO:0016161 beta-amylase activity IEP Predicted GO
MF GO:0016491 oxidoreductase activity IEP Predicted GO
MF GO:0016775 phosphotransferase activity, nitrogenous group as acceptor IEP Predicted GO
MF GO:0016830 carbon-carbon lyase activity IEP Predicted GO
MF GO:0019001 guanyl nucleotide binding IEP Predicted GO
MF GO:0032549 ribonucleoside binding IEP Predicted GO
MF GO:0032550 purine ribonucleoside binding IEP Predicted GO
MF GO:0032553 ribonucleotide binding IEP Predicted GO
MF GO:0032561 guanyl ribonucleotide binding IEP Predicted GO
BP GO:0034755 iron ion transmembrane transport IEP Predicted GO
BP GO:0035556 intracellular signal transduction IEP Predicted GO
MF GO:0036094 small molecule binding IEP Predicted GO
BP GO:0042401 cellular biogenic amine biosynthetic process IEP Predicted GO
BP GO:0042726 flavin-containing compound metabolic process IEP Predicted GO
BP GO:0042727 flavin-containing compound biosynthetic process IEP Predicted GO
MF GO:0043167 ion binding IEP Predicted GO
MF GO:0043168 anion binding IEP Predicted GO
BP GO:0044106 cellular amine metabolic process IEP Predicted GO
MF GO:0046915 transition metal ion transmembrane transporter activity IEP Predicted GO
MF GO:0050662 coenzyme binding IEP Predicted GO
BP GO:0055114 oxidation-reduction process IEP Predicted GO
MF GO:0070011 peptidase activity, acting on L-amino acid peptides IEP Predicted GO
BP GO:0097164 ammonium ion metabolic process IEP Predicted GO
MF GO:0097367 carbohydrate derivative binding IEP Predicted GO
MF GO:1901265 nucleoside phosphate binding IEP Predicted GO
InterPro domains Description Start Stop
IPR033755 PdxS/SNZ_N 29 233
No external refs found!