1. Home
  2. Species
  3. Solanum lycopersicum
  4. Sequence
  5. Solyc12g008990

Solyc12g008990


Description : Kinase family protein (AHRD V3.3 *** D7MM98_ARALL)


Gene families : OG_42_0000143 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000143_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc12g008990
Cluster HCCA clusters: Cluster_98

Target Alias Description ECC score Gene Family Method Actions
A4A49_19790 No alias u-box domain-containing protein 35 0.02 Orthogroups_2024-Update
Bradi1g46860 No alias Protein kinase protein with adenine nucleotide alpha... 0.02 Orthogroups_2024-Update
Brara.C04054.1 No alias EC_2.7 transferase transferring phosphorus-containing... 0.02 Orthogroups_2024-Update
Brara.E02184.1 No alias EC_2.7 transferase transferring phosphorus-containing... 0.02 Orthogroups_2024-Update
GRMZM2G079284 No alias U-box domain-containing protein kinase family protein 0.02 Orthogroups_2024-Update
GRMZM2G301512 No aliasAt1g44830 U-box domain-containing protein kinase family protein 0.03 Orthogroups_2024-Update
Kfl00015_0490 kfl00015_0490_v1.1 (at2g45920 : 81.3) U-box domain-containing protein;... 0.02 Orthogroups_2024-Update
Sopen06g022280 No alias Protein kinase domain 0.02 Orthogroups_2024-Update
evm.model.tig00020629.45 No alias no hits & (original description: no original description) 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0004672 protein kinase activity IEA InterProScan predictions
MF GO:0004842 ubiquitin-protein transferase activity IEA InterProScan predictions
BP GO:0006468 protein phosphorylation IEA InterProScan predictions
BP GO:0006950 response to stress IEA InterProScan predictions
BP GO:0016567 protein ubiquitination IEA InterProScan predictions
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP Predicted GO
MF GO:0030599 pectinesterase activity IEP Predicted GO
BP GO:0042545 cell wall modification IEP Predicted GO
MF GO:0140110 transcription regulator activity IEP Predicted GO
InterPro domains Description Start Stop
IPR001245 Ser-Thr/Tyr_kinase_cat_dom 404 656
IPR003613 Ubox_domain 684 750
IPR006016 UspA 30 171
No external refs found!