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  5. Pp1s55_167V6

Pp1s55_167V6


Description : pectin methylesterase


Gene families : OG_42_0000087 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000087_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Physcomitrella release: Pp1s55_167V6
Cluster HCCA clusters: Cluster_108

Target Alias Description ECC score Gene Family Method Actions
81583 No alias Pectin lyase-like superfamily protein 0.03 Orthogroups_2024-Update
A4A49_29596 No alias putative pectinesterase 29 0.01 Orthogroups_2024-Update
A4A49_32955 No alias putative pectinesterase 53 0.03 Orthogroups_2024-Update
At2g36700 No alias Putative pectinesterase 14... 0.04 Orthogroups_2024-Update
At2g47280 No alias Probable pectinesterase 66... 0.03 Orthogroups_2024-Update
At5g07420 No alias Probable pectinesterase 49... 0.02 Orthogroups_2024-Update
At5g07430 No alias Probable pectinesterase 50... 0.04 Orthogroups_2024-Update
Bradi1g21810 No alias Pectin lyase-like superfamily protein 0.03 Orthogroups_2024-Update
Bradi2g44500 No alias pectinesterase 11 0.03 Orthogroups_2024-Update
Brara.A02274.1 No alias pectin methylesterase 0.03 Orthogroups_2024-Update
Brara.B02987.1 No alias pectin methylesterase 0.02 Orthogroups_2024-Update
Brara.F03540.1 No alias pectin methylesterase 0.02 Orthogroups_2024-Update
Glyma.01G209500 No alias Pectin lyase-like superfamily protein 0.02 Orthogroups_2024-Update
Glyma.02G294700 No alias Pectin lyase-like superfamily protein 0.02 Orthogroups_2024-Update
Glyma.07G125100 No alias Pectin lyase-like superfamily protein 0.02 Orthogroups_2024-Update
Glyma.18G262500 No alias pectin methylesterase 31 0.03 Orthogroups_2024-Update
HORVU2Hr1G032220.4 No alias pectin methylesterase 0.03 Orthogroups_2024-Update
LOC_Os04g46740 No alias pectinesterase, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os08g12410 No alias pectinesterase, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os09g39760 No alias pectinesterase, putative, expressed 0.02 Orthogroups_2024-Update
MA_10267810g0010 No alias (at5g47500 : 480.0) Pectin lyase-like superfamily... 0.02 Orthogroups_2024-Update
MA_28575g0010 No alias (at5g47500 : 447.0) Pectin lyase-like superfamily... 0.03 Orthogroups_2024-Update
MA_6149868g0010 No alias (at2g36710 : 275.0) Pectin lyase-like superfamily... 0.02 Orthogroups_2024-Update
PSME_00014679-RA No alias (at5g19730 : 298.0) Pectin lyase-like superfamily... 0.03 Orthogroups_2024-Update
PSME_00022041-RA No alias (at5g55590 : 238.0) Encodes a protein with pectin... 0.03 Orthogroups_2024-Update
PSME_00027800-RA No alias (at5g47500 : 310.0) Pectin lyase-like superfamily... 0.02 Orthogroups_2024-Update
PSME_00045931-RA No alias (at5g47500 : 448.0) Pectin lyase-like superfamily... 0.02 Orthogroups_2024-Update
Potri.003G076900 No alias Pectin lyase-like superfamily protein 0.02 Orthogroups_2024-Update
Potri.004G033700 No alias Pectin lyase-like superfamily protein 0.02 Orthogroups_2024-Update
Potri.006G137100 No alias Pectin lyase-like superfamily protein 0.02 Orthogroups_2024-Update
Potri.006G186000 No alias Pectin lyase-like superfamily protein 0.02 Orthogroups_2024-Update
Potri.007G015700 No alias Pectin lyase-like superfamily protein 0.02 Orthogroups_2024-Update
Potri.008G104800 No alias Pectin lyase-like superfamily protein 0.03 Orthogroups_2024-Update
Potri.014G117100 No alias Pectin lyase-like superfamily protein 0.04 Orthogroups_2024-Update
Pp1s175_19V6 No alias pectin methylesterase 0.06 Orthogroups_2024-Update
Pp1s461_15V6 No alias pectin methylesterase 0.03 Orthogroups_2024-Update
Seita.5G313900.1 No alias pectin methylesterase 0.02 Orthogroups_2024-Update
Sobic.002G138400.1 No alias pectin methylesterase 0.02 Orthogroups_2024-Update
Solyc01g079180 No alias Pectinesterase (AHRD V3.3 *** K4AXG4_SOLLC) 0.02 Orthogroups_2024-Update
Solyc04g080530 No alias Pectinesterase (AHRD V3.3 *** K4BVD2_SOLLC) 0.02 Orthogroups_2024-Update
Solyc09g091730 No alias Pectinesterase (AHRD V3.3 *** K4CWJ9_SOLLC) 0.04 Orthogroups_2024-Update
Sopen04g034120 No alias Pectinesterase 0.02 Orthogroups_2024-Update
Sopen07g022810 No alias Pectinesterase 0.02 Orthogroups_2024-Update
Sopen09g034620 No alias Pectinesterase 0.04 Orthogroups_2024-Update
Sopen11g028850 No alias Pectinesterase 0.02 Orthogroups_2024-Update
Sopen12g003480 No alias Pectinesterase 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0030599 pectinesterase activity IEA InterProScan predictions
BP GO:0042545 cell wall modification IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003885 D-arabinono-1,4-lactone oxidase activity IEP Predicted GO
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Predicted GO
MF GO:0004615 phosphomannomutase activity IEP Predicted GO
MF GO:0004857 enzyme inhibitor activity IEP Predicted GO
MF GO:0005506 iron ion binding IEP Predicted GO
CC GO:0005575 cellular_component IEP Predicted GO
CC GO:0005576 extracellular region IEP Predicted GO
CC GO:0005618 cell wall IEP Predicted GO
CC GO:0005737 cytoplasm IEP Predicted GO
BP GO:0005975 carbohydrate metabolic process IEP Predicted GO
BP GO:0005976 polysaccharide metabolic process IEP Predicted GO
BP GO:0005991 trehalose metabolic process IEP Predicted GO
BP GO:0005992 trehalose biosynthetic process IEP Predicted GO
BP GO:0006073 cellular glucan metabolic process IEP Predicted GO
BP GO:0006631 fatty acid metabolic process IEP Predicted GO
BP GO:0006633 fatty acid biosynthetic process IEP Predicted GO
BP GO:0008152 metabolic process IEP Predicted GO
BP GO:0008610 lipid biosynthetic process IEP Predicted GO
BP GO:0009225 nucleotide-sugar metabolic process IEP Predicted GO
BP GO:0009226 nucleotide-sugar biosynthetic process IEP Predicted GO
BP GO:0009298 GDP-mannose biosynthetic process IEP Predicted GO
CC GO:0016020 membrane IEP Predicted GO
BP GO:0016226 iron-sulfur cluster assembly IEP Predicted GO
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Predicted GO
MF GO:0016740 transferase activity IEP Predicted GO
MF GO:0016746 transferase activity, transferring acyl groups IEP Predicted GO
MF GO:0016747 transferase activity, transferring acyl groups other than amino-acyl groups IEP Predicted GO
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Predicted GO
MF GO:0016758 transferase activity, transferring hexosyl groups IEP Predicted GO
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP Predicted GO
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Predicted GO
MF GO:0016840 carbon-nitrogen lyase activity IEP Predicted GO
MF GO:0016843 amine-lyase activity IEP Predicted GO
MF GO:0016844 strictosidine synthase activity IEP Predicted GO
MF GO:0016853 isomerase activity IEP Predicted GO
MF GO:0016868 intramolecular transferase activity, phosphotransferases IEP Predicted GO
MF GO:0016899 oxidoreductase activity, acting on the CH-OH group of donors, oxygen as acceptor IEP Predicted GO
BP GO:0019673 GDP-mannose metabolic process IEP Predicted GO
BP GO:0019725 cellular homeostasis IEP Predicted GO
MF GO:0020037 heme binding IEP Predicted GO
CC GO:0030126 COPI vesicle coat IEP Predicted GO
MF GO:0030234 enzyme regulator activity IEP Predicted GO
CC GO:0030312 external encapsulating structure IEP Predicted GO
BP GO:0031163 metallo-sulfur cluster assembly IEP Predicted GO
BP GO:0032787 monocarboxylic acid metabolic process IEP Predicted GO
BP GO:0042592 homeostatic process IEP Predicted GO
BP GO:0043170 macromolecule metabolic process IEP Predicted GO
BP GO:0044042 glucan metabolic process IEP Predicted GO
BP GO:0044237 cellular metabolic process IEP Predicted GO
BP GO:0044238 primary metabolic process IEP Predicted GO
BP GO:0044255 cellular lipid metabolic process IEP Predicted GO
BP GO:0044260 cellular macromolecule metabolic process IEP Predicted GO
BP GO:0044262 cellular carbohydrate metabolic process IEP Predicted GO
BP GO:0044264 cellular polysaccharide metabolic process IEP Predicted GO
BP GO:0045454 cell redox homeostasis IEP Predicted GO
BP GO:0046351 disaccharide biosynthetic process IEP Predicted GO
MF GO:0046527 glucosyltransferase activity IEP Predicted GO
MF GO:0046906 tetrapyrrole binding IEP Predicted GO
MF GO:0048037 cofactor binding IEP Predicted GO
CC GO:0048046 apoplast IEP Predicted GO
BP GO:0065008 regulation of biological quality IEP Predicted GO
BP GO:0071704 organic substance metabolic process IEP Predicted GO
BP GO:0072330 monocarboxylic acid biosynthetic process IEP Predicted GO
MF GO:0098772 molecular function regulator IEP Predicted GO
InterPro domains Description Start Stop
IPR000070 Pectinesterase_cat 127 418
No external refs found!