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  5. Solyc12g009030

Solyc12g009030


Description : Transducin/WD40 repeat-like superfamily protein (AHRD V3.3 *** AT4G29830.1)


Gene families : OG_42_0005303 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0005303_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc12g009030
Cluster HCCA clusters: Cluster_165


Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP Predicted GO
MF GO:0003676 nucleic acid binding IEP Predicted GO
MF GO:0003700 DNA-binding transcription factor activity IEP Predicted GO
MF GO:0003779 actin binding IEP Predicted GO
MF GO:0004812 aminoacyl-tRNA ligase activity IEP Predicted GO
MF GO:0004826 phenylalanine-tRNA ligase activity IEP Predicted GO
MF GO:0004871 obsolete signal transducer activity IEP Predicted GO
CC GO:0005834 heterotrimeric G-protein complex IEP Predicted GO
BP GO:0006399 tRNA metabolic process IEP Predicted GO
BP GO:0006418 tRNA aminoacylation for protein translation IEP Predicted GO
BP GO:0006432 phenylalanyl-tRNA aminoacylation IEP Predicted GO
BP GO:0007186 G protein-coupled receptor signaling pathway IEP Predicted GO
MF GO:0016874 ligase activity IEP Predicted GO
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP Predicted GO
BP GO:0043038 amino acid activation IEP Predicted GO
BP GO:0043039 tRNA aminoacylation IEP Predicted GO
MF GO:0043565 sequence-specific DNA binding IEP Predicted GO
CC GO:0044459 plasma membrane part IEP Predicted GO
BP GO:0050789 regulation of biological process IEP Predicted GO
BP GO:0050794 regulation of cellular process IEP Predicted GO
BP GO:0065007 biological regulation IEP Predicted GO
CC GO:0098797 plasma membrane protein complex IEP Predicted GO
MF GO:0140101 catalytic activity, acting on a tRNA IEP Predicted GO
MF GO:0140110 transcription regulator activity IEP Predicted GO
CC GO:1902494 catalytic complex IEP Predicted GO
CC GO:1905360 GTPase complex IEP Predicted GO
InterPro domains Description Start Stop
IPR001680 WD40_repeat 159 186
IPR001680 WD40_repeat 192 231
IPR001680 WD40_repeat 237 273
IPR001680 WD40_repeat 51 87
IPR001680 WD40_repeat 94 131
IPR001680 WD40_repeat 11 46
No external refs found!