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  5. Pp1s55_280V6

Pp1s55_280V6


Description : mikc* mads-box transcription factor


Gene families : OG_42_0000009 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Physcomitrella release: Pp1s55_280V6
Cluster HCCA clusters: Cluster_186

Target Alias Description ECC score Gene Family Method Actions
121275 No alias K-box region and MADS-box transcription factor family protein 0.02 Orthogroups_2024-Update
A4A49_16645 No alias agamous-like mads-box protein agl11 0.03 Orthogroups_2024-Update
A4A49_18989 No alias agamous-like mads-box protein agl19 0.02 Orthogroups_2024-Update
At1g24260 No alias At1g24260 [Source:UniProtKB/TrEMBL;Acc:B4F7R9] 0.02 Orthogroups_2024-Update
Bradi3g32090 No alias AGAMOUS-like 20 0.03 Orthogroups_2024-Update
Brara.I02486.1 No alias MADS/AGL-type transcription factor 0.02 Orthogroups_2024-Update
GRMZM2G152862 No alias K-box region and MADS-box transcription factor family protein 0.03 Orthogroups_2024-Update
Glyma.08G105400 No alias K-box region and MADS-box transcription factor family protein 0.03 Orthogroups_2024-Update
Glyma.14G183800 No alias AGAMOUS-like 16 0.02 Orthogroups_2024-Update
Glyma.18G273600 No alias AGAMOUS-like 8 0.02 Orthogroups_2024-Update
HORVU1Hr1G029220.1 No alias MADS/AGL-type transcription factor 0.03 Orthogroups_2024-Update
MA_101463g0010 No alias (q9xj60|mad50_orysa : 102.0) MADS-box transcription... 0.02 Orthogroups_2024-Update
Potri.001G058400 No alias K-box region and MADS-box transcription factor family protein 0.03 Orthogroups_2024-Update
Pp1s209_130V6 No alias mads-box transcription factor 0.03 Orthogroups_2024-Update
Pp1s37_353V6 No alias mads box 0.03 Orthogroups_2024-Update
Pp1s55_304V6 No alias agamous-like protein 0.03 Orthogroups_2024-Update
Seita.1G272300.1 No alias MADS/AGL-type transcription factor 0.04 Orthogroups_2024-Update
Seita.6G223400.1 No alias regulatory protein *(SEPALLATA) of floral meristem... 0.03 Orthogroups_2024-Update
Seita.9G088900.1 No alias regulatory protein *(AP1/CAL/FUL) of floral meristem... 0.03 Orthogroups_2024-Update
Sobic.003G027000.1 No alias MADS/AGL-type transcription factor 0.03 Orthogroups_2024-Update
Sobic.007G192900.1 No alias MADS/AGL-type transcription factor 0.04 Orthogroups_2024-Update
Sobic.010G162300.1 No alias MADS/AGL-type transcription factor 0.03 Orthogroups_2024-Update
Solyc01g093960 No alias MADS-box transcription factor (AHRD V3.3 *** A0A072TNM9_MEDTR) 0.03 Orthogroups_2024-Update
Solyc06g035570 No alias No description available 0.03 Orthogroups_2024-Update
Solyc10g080030 No alias MADS-box transcription factor (AHRD V3.3 *** A0A072VJL7_MEDTR) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA InterProScan predictions
MF GO:0046983 protein dimerization activity IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0006904 vesicle docking involved in exocytosis IEP Predicted GO
BP GO:0007034 vacuolar transport IEP Predicted GO
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Predicted GO
BP GO:0022406 membrane docking IEP Predicted GO
BP GO:0048278 vesicle docking IEP Predicted GO
BP GO:0051640 organelle localization IEP Predicted GO
BP GO:0140029 exocytic process IEP Predicted GO
BP GO:0140056 organelle localization by membrane tethering IEP Predicted GO
InterPro domains Description Start Stop
IPR002100 TF_MADSbox 10 57
No external refs found!