Pp1s55_304V6


Description : agamous-like protein


Gene families : OG_42_0000009 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Physcomitrella release: Pp1s55_304V6
Cluster HCCA clusters: Cluster_203

Target Alias Description ECC score Gene Family Method Actions
A4A49_29655 No alias floral homeotic protein globosa 0.03 Orthogroups_2024-Update
Brara.D02091.1 No alias MADS/AGL-type transcription factor 0.02 Orthogroups_2024-Update
Brara.I04053.1 No alias MADS/AGL-type transcription factor 0.03 Orthogroups_2024-Update
GRMZM2G099522 No alias K-box region and MADS-box transcription factor family protein 0.03 Orthogroups_2024-Update
GRMZM2G359952 No alias K-box region and MADS-box transcription factor family protein 0.02 Orthogroups_2024-Update
Glyma.08G105400 No alias K-box region and MADS-box transcription factor family protein 0.04 Orthogroups_2024-Update
Glyma.09G149000 No alias AGAMOUS-like 6 0.02 Orthogroups_2024-Update
LOC_Os05g34940 No alias OsMADS4 - MADS-box family gene with MIKCc type-box, expressed 0.02 Orthogroups_2024-Update
Potri.009G055700 No alias AGAMOUS-like 15 0.02 Orthogroups_2024-Update
Potri.009G079000 No alias AGAMOUS-like 44 0.04 Orthogroups_2024-Update
Pp1s55_280V6 No alias mikc* mads-box transcription factor 0.03 Orthogroups_2024-Update
Solyc04g078300 No alias MADS-box transcription factor family protein (AHRD V3.3... 0.02 Orthogroups_2024-Update
Sopen04g030410 No alias K-box region 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA InterProScan predictions
MF GO:0003700 DNA-binding transcription factor activity IEA InterProScan predictions
CC GO:0005634 nucleus IEA InterProScan predictions
BP GO:0006355 regulation of transcription, DNA-templated IEA InterProScan predictions
MF GO:0046983 protein dimerization activity IEA InterProScan predictions
Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Predicted GO
MF GO:0004672 protein kinase activity IEP Predicted GO
BP GO:0006464 cellular protein modification process IEP Predicted GO
BP GO:0006468 protein phosphorylation IEP Predicted GO
BP GO:0006793 phosphorus metabolic process IEP Predicted GO
BP GO:0006796 phosphate-containing compound metabolic process IEP Predicted GO
MF GO:0008641 ubiquitin-like modifier activating enzyme activity IEP Predicted GO
MF GO:0016301 kinase activity IEP Predicted GO
BP GO:0016310 phosphorylation IEP Predicted GO
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Predicted GO
MF GO:0016874 ligase activity IEP Predicted GO
MF GO:0016877 ligase activity, forming carbon-sulfur bonds IEP Predicted GO
MF GO:0036094 small molecule binding IEP Predicted GO
BP GO:0036211 protein modification process IEP Predicted GO
MF GO:0043167 ion binding IEP Predicted GO
MF GO:0043168 anion binding IEP Predicted GO
BP GO:0043412 macromolecule modification IEP Predicted GO
MF GO:0050660 flavin adenine dinucleotide binding IEP Predicted GO
MF GO:1901265 nucleoside phosphate binding IEP Predicted GO
InterPro domains Description Start Stop
IPR002100 TF_MADSbox 74 121
IPR002487 TF_Kbox 147 231
No external refs found!